Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 1e-15
>seq2
Length=84732013
Score = 98.7 bits (108), Expect = 1e-15
Identities = 380/585 (65%), Gaps = 19/585 (3%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || |||| ||| | || ||||| |||||||| ||||| ||||||| || |
Sbjct 24868098 TGTTCCCGATCAAGTACCCCTCGATCTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCT 24868157
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG---ACTCGTTTGA 125112
|||| | ||| ||||||||||| | | || | | | ||||| || | | |
Sbjct 24868158 GGACCGCCGAGGAGGTCGATCTCAGCCAAGATATCCGCCACTGGGACCAAACCC---TAA 24868214
Query 125113 CTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAA 125172
| | ||||| | || | | ||| | | |||||||| |||| |||||| || |
Sbjct 24868215 CCGCCGACGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCA 24868274
Query 125173 TCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGT 125229
||||| || || || | | | || ||| | ||| | ||| || | ||||
Sbjct 24868275 TCGTCCTGGAGAACCTCGCCGGC-CGTTTCATGAAGGAGGT--CCAGGTCGCCGAGGCCA 24868331
Query 125230 CGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACAC 125289
| ||| ||||| ||||| ||| || |||||| | ||||| || |||||||| |
Sbjct 24868332 GGGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTTC 24868391
Query 125290 TGATTGACATGTACATTCGCGA-TCCGCAACGTAAACACATGC-TCTTTAACGCAATCGA 125347
| | || ||||| || |||| | | ||| | || | ||| |||| |||||
Sbjct 24868392 TCCTCGAATCCTACATCAAGGACTCCG--ATGAAAAGAGCCGCCTTTTTCACGCCATCGA 24868449
Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407
|| | || | | || ||||| | |||| | | ||||||||||| | |
Sbjct 24868450 GACCATCCCTTGCGTCGCCAAGAAGGCCGAGTGGGCGCTGAAGTGGATCGATGGCTCAGA 24868509
Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467
||||| |||||| ||| || | || || || ||| || || || ||||| || ||
Sbjct 24868510 GTCTTT---CGCCGAGAGATTGATCGCTTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGG 24868566
Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527
|| ||| ||||| || ||||| || ||||||||| | ||||| || | ||
Sbjct 24868567 GAGCTTTTGTGCCATTTTCTGGCTTAAAAAGCGCGGATTGATGCCGGGGTTAACCTTTTC 24868626
Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
|||||| | |||||||||||||| ||||| || || || || ||
Sbjct 24868627 AAACGAGCTCATATCTCGAGACGAAGGCCTCCATTGCGATTTCGC 24868671
Score = 98.7 bits (108), Expect = 1e-15
Identities = 380/585 (65%), Gaps = 19/585 (3%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || |||| ||| | || ||||| |||||||| ||||| ||||||| || |
Sbjct 26603528 TGTTCCCGATCAAGTACCCCTCGATCTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCT 26603469
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG---ACTCGTTTGA 125112
|||| | ||| ||||||||||| | | || | | | ||||| || | | |
Sbjct 26603468 GGACCGCCGAGGAGGTCGATCTCAGCCAAGATATCCGCCACTGGGACCAAACCC---TAA 26603412
Query 125113 CTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAA 125172
| | ||||| | || | | ||| | | |||||||| |||| |||||| || |
Sbjct 26603411 CCGCCGACGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCA 26603352
Query 125173 TCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGT 125229
||||| || || || | | | || ||| | ||| | ||| || | ||||
Sbjct 26603351 TCGTCCTGGAGAACCTCGCCGGC-CGTTTCATGAAGGAGGT--CCAGGTCGCCGAGGCCA 26603295
Query 125230 CGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACAC 125289
| ||| ||||| ||||| ||| || |||||| | ||||| || |||||||| |
Sbjct 26603294 GGGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTTC 26603235
Query 125290 TGATTGACATGTACATTCGCGA-TCCGCAACGTAAACACATGC-TCTTTAACGCAATCGA 125347
| | || ||||| || |||| | | ||| | || | ||| |||| |||||
Sbjct 26603234 TCCTCGAATCCTACATCAAGGACTCCG--ATGAAAAGAGCCGCCTTTTTCACGCCATCGA 26603177
Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407
|| | || | | || ||||| | |||| | | ||||||||||| | |
Sbjct 26603176 GACCATCCCTTGCGTCGCCAAGAAGGCCGAGTGGGCGCTGAAGTGGATCGATGGCTCAGA 26603117
Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467
||||| |||||| ||| || | || || || ||| || || || ||||| || ||
Sbjct 26603116 GTCTTT---CGCCGAGAGATTGATCGCTTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGG 26603060
Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527
|| ||| ||||| || ||||| || ||||||||| | ||||| || | ||
Sbjct 26603059 GAGCTTTTGTGCCATTTTCTGGCTTAAAAAGCGCGGATTGATGCCGGGGTTAACCTTTTC 26603000
Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
|||||| | |||||||||||||| ||||| || || || || ||
Sbjct 26602999 AAACGAGCTCATATCTCGAGACGAAGGCCTCCATTGCGATTTCGC 26602955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740949967873920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |