Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 5e-12
>seq2
Length=84732013
Score = 86.0 bits (94), Expect = 5e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 13143 ACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAA 13202
||| || || || ||||| || || | ||||| |||| | ||| |||||||||||||
Sbjct 24868682 ACAACAAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAA 24868623
Query 13203 ATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCC- 13261
| |||| |||||||| | || || ||||||| ||| || || ||| |||| | |||
Sbjct 24868622 AGGTTAACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCG 24868564
Query 13262 GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTC 13305
|| || || || ||||| || ||||| || ||||| || ||
Sbjct 24868563 GAGAAGAAAATCCCTTCGACGCAAGCAAAAGCGATCAATCTCTC 24868520
Score = 86.0 bits (94), Expect = 5e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 13143 ACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAA 13202
||| || || || ||||| || || | ||||| |||| | ||| |||||||||||||
Sbjct 26602944 ACAACAAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAA 26603003
Query 13203 ATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCC- 13261
| |||| |||||||| | || || ||||||| ||| || || ||| |||| | |||
Sbjct 26603004 AGGTTAACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCG 26603062
Query 13262 GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTC 13305
|| || || || ||||| || ||||| || ||||| || ||
Sbjct 26603063 GAGAAGAAAATCCCTTCGACGCAAGCAAAAGCGATCAATCTCTC 26603106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430920461364384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |