Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 2e-34
seq6 134 3e-26
seq5 134 3e-26
seq8 116 9e-21
seq9 91.5 3e-13
>seq3
Length=113259003
Score = 161 bits (178), Expect = 2e-34
Identities = 176/231 (76%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || | ||| | ||||| || ||||| || |||||||||
Sbjct 21885943 ATGCCTCCCCTCAGCCTGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTATAGTCA 21886002
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || |||| || || || || || ||||||||||| || |||||||| || || ||
Sbjct 21886003 GCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGG 21886062
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| || || ||||| ||||| ||||||||||| || | ||||||| || | ||
Sbjct 21886063 GGGATTCCCTCCTTGTCCTGGATCTTGGCTTTTACATTGTCAATGGTATCG-GAGCTCTC 21886121
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || || || ||||||||
Sbjct 21886122 AACCTCGAGAGTAATCGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 21886172
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || | ||| | || || || ||||| || || ||||||
Sbjct 21885715 ATGCCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCA 21885774
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || | || || ||||||||||| |||||||| || || ||
Sbjct 21885775 GCAAGGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGG 21885834
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||||||||| ||||||||||| || | ||| || || | ||
Sbjct 21885835 GGGATGCCCTCCTTGTCCTGAATCTTGGCTTTTACATTGTCGATGGTGTC-TGAGCTCTC 21885893
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || |||||||| ||||| || || || ||||| ||||||||
Sbjct 21885894 CACTTCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 21885944
Score = 125 bits (138), Expect = 2e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || || || | || || || ||||| || |||||||||
Sbjct 21885487 ATGCCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCA 21885546
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || || || |||||||| | |||||| || || ||
Sbjct 21885547 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGG 21885606
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| || || ||||| ||||||||||| ||||| || | ||| ||| || | ||
Sbjct 21885607 GGGATTCCCTCCTTGTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCG-GAGCTCTC 21885665
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || ||||| || || || || || ||||| ||||||||
Sbjct 21885666 CACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716
Score = 116 bits (128), Expect = 9e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| ||||| || | | |||| || || || || || || |||
Sbjct 21885292 GTGGACTCCTTCTGAATGTTATAATCCGCCAACGTTCGCCCATCCTCAAGCTGCTTGCCA 21885351
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || || || || ||||| || || ||||| |||||||||||
Sbjct 21885352 GCAAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCTTTC 21885411
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||| ||| || | || || || | || || ||||| || || || ||
Sbjct 21885412 ACATTGTCGATGGTGTCG-GAGCTCTCCACTTCCAAAGTGATGGTCTTGCCGGTTAGGGT 21885470
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 21885471 CTTAACAAAAATCTGCAT 21885488
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | ||| || || ||||| || || ||||| | || || | || ||
Sbjct 21885048 AAGCACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGTCCATC 21885107
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || ||||| || ||||||||||| || ||||| || || || || ||
Sbjct 21885108 CTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTTGTC 21885167
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| ||||| || || ||||| || | || ||| || | || ||||| || || || |
Sbjct 21885168 CTGGATCTTCGCCTTCACATTGTCAATCGTGTCG-GAGCTCTCCACCTCCAGGGTGATGG 21885226
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| || || || || || ||||| ||||||||
Sbjct 21885227 TCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 21885260
>seq6
Length=78779235
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | ||||| || || ||||| | || ||||| ||||| ||||| || |||
Sbjct 3703539 ATTCCTCCACGCAGCCTGAGGACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCA 3703480
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | ||||| || |||||||||||||| || || ||||| || || || |||
Sbjct 3703479 GCCAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGA 3703420
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || || || ||||| || || ||||| || | |||||| || | ||
Sbjct 3703419 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATAGTATCG-GAGCTCTC 3703361
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || || || || || || || || ||||| || |||||
Sbjct 3703360 GACCTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | ||| || ||||| | ||||| || || || || || || ||
Sbjct 3703083 ATGCCACCCCTGAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCC 3703024
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || ||||| ||||| || || || | || || || |||
Sbjct 3703023 GCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGA 3702964
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||||||||| ||||| || | ||| || | |||
Sbjct 3702963 GGGATCCCTTCCTTGTCCTGGATCTTTGCTTTAACATTGTCGATGGTGTCAGAGGATTCA 3702904
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || |||||||| ||||| ||||||||
Sbjct 3702903 ACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCACAAAGATCTGCAT 3702854
Score = 113 bits (124), Expect = 1e-19
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| | || ||||| | || || || |||||||| |||||||| | | ||| |
Sbjct 3703299 AGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCCAAAGTACGG 3703240
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || ||||||||||| || | ||| || || || ||||| || || ||
Sbjct 3703239 CCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCCTCC 3703180
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| || || ||||| || || ||||| || | |||||| || | || ||||| | ||
Sbjct 3703179 TTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCG-GAGCTCTCGACCTCCAACGT 3703121
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || ||||| || || || ||||| ||||||||
Sbjct 3703120 TATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | ||||| || ||||||||||| || |||| ||||| || || ||
Sbjct 3703978 AAGCACAAGGTGGAGAGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCTCCCATC 3703919
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || || || || || || | |||||| ||||| || || || || || |||||
Sbjct 3703918 TTCAAGCTGCTTCCCTGCGAAGATCAACCTCTGCTGATCCGGCGGAATCCCCTCCTTATC 3703859
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| ||||| || || || || || | || || || | || ||||| | || || |
Sbjct 3703858 CTGTATCTTCGCCTTGACGTTGTCGATCGTGTC-AGAGCTCTCCACCTCCAAGGTGATCG 3703800
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| || || | || || ||||||||||||||
Sbjct 3703799 TCTTCCCCGTCAAGGTCTTGACAAATATCTGCAT 3703766
>seq5
Length=131469567
Score = 134 bits (148), Expect = 3e-26
Identities = 113/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| ||||| ||||| | |||||||| | || || |||||||| || || || ||||
Sbjct 77212196 TTCCTCCTCTAAGCCTCAAAACTAGATGAAGAGTTGACTCTTTCTGTATGTTGTAATCAG 77212137
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| || || || ||||| | ||| ||||||||||||||||||||||| ||||||||||
Sbjct 77212136 CCAGGGTCCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTCTGCTGATCAGGAG 77212077
Query 104451 GTATTCCTTCTTTATCCTG 104469
|||| || |||||||||||
Sbjct 77212076 GTATACCCTCTTTATCCTG 77212058
Score = 131 bits (144), Expect = 4e-25
Identities = 114/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 104328 TTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387
|| |||| || || ||||| || || ||||| | ||| || || |||||||| || || |
Sbjct 128086105 TTGTTCCACCCCTCAGCCTGAGAACAAGATGAAGTGTTGACTCCTTCTGAATGTTGTAAT 128086046
Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447
||| || || | ||| ||||| |||||||||||||||||||| | |||||| |||||||
Sbjct 128086045 CAGCAAGGGTGCGACCATCTTCCAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCAG 128085986
Query 104448 GAGGTATTCCTTCTTTATCCTG 104469
||||||| || || ||||||||
Sbjct 128085985 GAGGTATCCCCTCCTTATCCTG 128085964
>seq8
Length=131339754
Score = 116 bits (128), Expect = 9e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| | ||| || ||||| | || || || || || || |||||||||
Sbjct 3136448 ATGCCACCTCTTAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGTCA 3136507
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || || ||||||||||| |||||||| || || ||
Sbjct 3136508 GCAAGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCGGG 3136567
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| || || || || ||||| || | || ||| || | ||
Sbjct 3136568 GGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCG-GAGCTCTC 3136626
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || || || || || | || || ||||| ||||||||
Sbjct 3136627 GACCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 3136677
>seq9
Length=68543460
Score = 91.5 bits (100), Expect = 3e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
|||||||| ||||| ||||| ||||| ||||| || | ||| ||||| || |||||
Sbjct 1090669 CCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 1090728
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| || || || || ||||| || ||||| ||||| ||||||||||||
Sbjct 1090729 AGAGTGATTGTTTTCCCAGTTAGGGTTTTGACAAAGATCTGCATTTTG 1090776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151224440972736
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