Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 7e-16
seq2 100 7e-16
>seq4
Length=146560859
Score = 100 bits (110), Expect = 7e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||| || ||| |||||||| || | |||||| || ||| | |||||| |||| |
Sbjct 9258922 ATGAAAGATGATAGTATCGAGGGCATATATGACACTCTCAAGGAGTGTGCTGTTATAAGC 9258981
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741
|| ||| || ||||||||||| || | |||||| |||||||| | |||||| |||
Sbjct 9258982 AAATCTGCTGGAGGAATTGGTGTTTCTGTTCACAATATTCGTGCAATGGGCAGTTATATT 9259041
Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
|| || ||| ||| || ||||| | || || ||| | | |||||| | | |||
Sbjct 9259042 CGTGGAACAAACGGAACTTCTAATGGTATTGTCCCAATGTTAAGGGTGTTTAATGACACT 9259101
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839
|| | || || || || || ||||| ||| | || ||
Sbjct 9259102 GCTCGCTATGTTGATCAAGGGGGAGGCAAGAGGAAGGG 9259139
>seq2
Length=84732013
Score = 100 bits (110), Expect = 7e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT-GAACAATGAACGTTCATTCGCGGAACGTCT 22496
|| ||||| || ||||||||||| ||||| || | | | || ||||| || | |
Sbjct 24868469 AAGAAGGCCGAGTGGGCGCTGAAGTGGATCGATGGCTCAGAG-TCTTTCGCCGAGAGATT 24868527
Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTT-TTCTGGAGCATTTTGTGCAATCTTTT 22555
|| || |||||| || ||||| |||||||| | | ||||| |||||||| || || |
Sbjct 24868528 GATCGCTTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAGC-TTTTGTGCCATTTTCT 24868586
Query 22556 GGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAG 22615
|||| ||||| || | | | |||||||| |||| |||||||| ||| | || ||||
Sbjct 24868587 GGCTTAAAAAGCGCGGATTGATGCCGGGGTTAACCTTTTCAAACGAGCTCATATCTCGAG 24868646
Query 22616 ATGAGGGTCTTCATACCGATTTTGCGTG 22643
| || || || ||| |||||| || ||
Sbjct 24868647 ACGAAGGCCTCCATTGCGATTTCGCTTG 24868674
Score = 100 bits (110), Expect = 7e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT-GAACAATGAACGTTCATTCGCGGAACGTCT 22496
|| ||||| || ||||||||||| ||||| || | | | || ||||| || | |
Sbjct 26603157 AAGAAGGCCGAGTGGGCGCTGAAGTGGATCGATGGCTCAGAG-TCTTTCGCCGAGAGATT 26603099
Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTT-TTCTGGAGCATTTTGTGCAATCTTTT 22555
|| || |||||| || ||||| |||||||| | | ||||| |||||||| || || |
Sbjct 26603098 GATCGCTTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAGC-TTTTGTGCCATTTTCT 26603040
Query 22556 GGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAG 22615
|||| ||||| || | | | |||||||| |||| |||||||| ||| | || ||||
Sbjct 26603039 GGCTTAAAAAGCGCGGATTGATGCCGGGGTTAACCTTTTCAAACGAGCTCATATCTCGAG 26602980
Query 22616 ATGAGGGTCTTCATACCGATTTTGCGTG 22643
| || || || ||| |||||| || ||
Sbjct 26602979 ACGAAGGCCTCCATTGCGATTTCGCTTG 26602952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303156682821344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |