Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
>seq3
Length=113259003
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| || ||||| || || || || ||| | ||| |||| |
Sbjct 21885944 ATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACTATCACCCTTGAAGTGGAGAGCTCA 21885885
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | ||||| |||||| || ||| || || || ||| ||||| || ||
Sbjct 21885884 GACAC-CATCGACAATGTAAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 21885826
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || |||| ||| ||||| || || || |||| | ||| | || || || ||
Sbjct 21885825 GCAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAGGATGGCCGTACCCTTGCTGACTACAA 21885766
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| || || ||||| || | ||| ||||| | || || | |||||
Sbjct 21885765 CATCCAGAAGGAGTCGACCCTCCATTTGGTGCTCAGGCTGAGGGGAGG 21885718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425282871687040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |