Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 2e-23
seq8 116 3e-21
seq6 116 3e-21
seq5 84.2 2e-11
>seq3
Length=113259003
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| || || || | || |||| || || ||||||||||| || ||||||||||| ||
Sbjct 21885033 CCCACCACGAAGACGAAGCACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGC 21885092
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
| ||| | ||||||| || ||||| ||| | || |||| |||||||||| |||
Sbjct 21885093 GAGGGTACGTCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGG 21885152
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||| ||||| || | | |||||| | | | | |||||| | ||||
Sbjct 21885153 GATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCAC 21885212
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || ||||| || || || ||||||||||||||
Sbjct 21885213 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 21885260
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | |||||||| || | || || ||||||||||| || ||||| ||||| ||
Sbjct 21885490 CCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCG 21885549
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | || ||||| ||| |||| | || ||| ||||| ||
Sbjct 21885550 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGG 21885609
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| || |||||| ||||| | | | | |||||| | ||||
Sbjct 21885610 ATTCCCTCCTTGTCCTGGATCTTTGCT--TTCACATTGTCGATGGTGTCGGAGCTCTCCA 21885667
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| |||||||| || ||||| || || |||||||||||||||||
Sbjct 21885668 CTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | ||||| || |||| ||| || || |||||||| || ||||||||||| ||
Sbjct 21885718 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 21885777
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | |||||||| || ||||| ||| |||| |||| ||| ||||| ||
Sbjct 21885778 AGGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGG 21885837
Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| ||||| || || ||| || || | | | | ||||| | ||||
Sbjct 21885838 ATGCCCTCCTTGTCCTGAATCTTGGCT--TTTACATTGTCGATGGTGTCTGAGCTCTCCA 21885895
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | |||||| || || || || || || |||||||||||||||||
Sbjct 21885896 CTTCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 21885944
Score = 104 bits (114), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||| || || |||| ||| | ||||| | ||
Sbjct 21885286 TGGAGGGTGGACTCCTTCTGAATGTTATAATCCGCCAACGTTCGCCCATCCTCAAGCTGC 21885345
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | ||||||| ||| ||||| || | ||||| ||||| || |||
Sbjct 21885346 TTGCCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTT 21885405
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
||| ||||| | | | | |||||| | |||| ||||| |||||||| || ||||
Sbjct 21885406 GCT--TTCACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTGCCGG 21885463
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
| || || || ||||||||||||||
Sbjct 21885464 TTAGGGTCTTAACAAAAATCTGCAT 21885488
>seq8
Length=131339754
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || ||||| || || | ||| || |||||||||||||| ||||||||||||||
Sbjct 3136223 CCTCCACGGAGCCTTAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCG 3136282
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||| | || || || ||| ||||||||| ||| ||||| ||
Sbjct 3136283 AGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGA 3136342
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| |||| ||| || | | | | ||||| | |||
Sbjct 3136343 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCAACC 3136402
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||||| ||||||| || |||||||||||||||||
Sbjct 3136403 TCAAGCGTGATGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| ||| | || || | ||| || || ||||||||||| ||||| ||||| ||
Sbjct 3136451 CCACCTCTTAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGTCAGCA 3136510
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | || || || ||| |||| |||| ||| |||||| ||
Sbjct 3136511 AGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCGGGGGG 3136570
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| |||| ||| || | | | | |||||| | |||
Sbjct 3136571 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCGGAGCTCTCGACC 3136630
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||||||||| |||| || |||||||||||||||||
Sbjct 3136631 TCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 3136677
Score = 109 bits (120), Expect = 4e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || || | || || || |||||||| || ||||||||||||||
Sbjct 122668959 CCTCCGCGGAGGCGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 122669018
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | ||||||| | || || ||||| |||| || ||||| |||||| ||
Sbjct 122669019 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGGCGCTGCTGGTCCGGGGGG 122669078
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| || || || ||| || | | | | ||||| || |||
Sbjct 122669079 ATCCCCTCCTTGTCTTGGATCTTGGC--CTTGACATTGTCGATCGTGTCCGAGGACTCGA 122669136
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| | ||||||||| || ||||| || |||||||| || |||||||| |||
Sbjct 122669137 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCATGTTG 122669189
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||| || || | || || |||||||||||||| |||||||| || ||
Sbjct 3135995 CCTCCACGAAGCCGAAGAACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCTGCT 3136054
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || || |||||| |||| |||| ||| ||||| ||
Sbjct 3136055 AGGGTGCGGCCGTCCTCAAGCTGCTTCCCCGCAAAAATGAGCCTCTGCTGGTCTGGGGGG 3136114
Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| ||||| ||| || || | | | | ||||| | |||
Sbjct 3136115 ATACCCTCTTTGTCCTGAATTTTGGCT--TTGACATTGTCGATTGTGTCAGAGCTCTCGA 3136172
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||||||||| || ||||| || || || || ||||||||
Sbjct 3136173 CCTCAAGGGTGATGGTTTTGCCAGTCAGTGTCTTAACGAAGATCTGCAT 3136221
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/213 (70%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||| || | || | | ||||| | |||
Sbjct 3136703 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCATCCTCGAGTTGC 3136762
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
|| || || |||| |||| ||| ||||| || | |||||| ||||| || ||
Sbjct 3136763 TTTCCTGCGAAAATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTG 3136822
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
||| || || | | | | |||||| | |||| || | |||||| || ||||| |
Sbjct 3136823 GCT--TTGACATTGTCAATAGTGTCTGAGCTCTCCACCTCAAGGGTGATAGTCTTTCCTG 3136880
Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTGTAGC 16943
| || || || ||||| ||||||| | ||||||
Sbjct 3136881 TAAGTGTCTTCACAAAGATCTGCA-TCTGTAGC 3136912
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || || | || || || ||||||||||| |||||||| || ||
Sbjct 3135767 CCACCACGAAGCCTGAGCACAAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCTGCA 3135826
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | ||||||| | || || || || | || |||| ||| || ||| ||
Sbjct 3135827 AGGGTTCGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGG 3135886
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| || || || | ||| || | | | | || || | ||||
Sbjct 3135887 ATGCCCTCCTTATCCTGTATCTTGGCCTTGACATTGTCGATTGTATCCGAGCTCTCCACC 3135946
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||| ||||||||||| ||||| || || || ||||| |||||
Sbjct 3135947 TCCAAGGTAATGGTTTTTCCTGTCAGGGTCTTAACGAAAATTTGCAT 3135993
>seq6
Length=78779235
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
|||||| || |||||||| |||| || || || |||||||| || |||||||| || ||
Sbjct 3703765 CCCTCCACGAAGCCTCAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGC 3703706
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
| || | | ||||| | |||||| || ||| | || |||| ||| ||||| ||
Sbjct 3703705 GAGAGTCCGGCCATCCTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 3703646
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| |||||| ||||| || | | ||| || | | | | ||||| | |||
Sbjct 3703645 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGAC 3703586
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct 3703585 CTCCAACGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCATT 3703537
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || ||||| || || | ||| || ||||| ||||| || || ||||| || |||
Sbjct 3703536 CCTCCACGCAGCCTGAGGACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCC 3703477
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||||| | |||||| || || | ||||||| || |||||| |||
Sbjct 3703476 AGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGGA 3703417
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| ||||| || || || ||| || | | | ||| ||| | |||
Sbjct 3703416 ATGCCCTCCTTGTCTTGGATCTTGGC--CTTGACATTATCAATAGTATCGGAGCTCTCGA 3703359
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||||||||||| || || ||||||||||| |||||
Sbjct 3703358 CCTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310
>seq5
Length=131469567
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| ||||||| || | ||| || || ||||| || ||||||||||| || |||
Sbjct 77212194 CCTCCTCTAAGCCTCAAAACTAGATGAAGAGTTGACTCTTTCTGTATGTTGTAATCAGCC 77212135
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || |||||||| || || ||| |||| |||| ||| || || |||
Sbjct 77212134 AGGGTCCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTCTGCTGATCAGGAGGT 77212075
Query 16829 ACGCCCTCTTTGTC 16842
| |||||||| ||
Sbjct 77212074 ATACCCTCTTTATC 77212061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405029782778080
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