Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
seq7 96.9 4e-15
seq5 87.8 2e-12
seq10 86.0 7e-12
seq8 86.0 7e-12
seq4 86.0 7e-12
seq3 86.0 7e-12
seq1 86.0 7e-12
seq9 82.4 8e-11
>seq2
Length=84732013
Score = 111 bits (122), Expect = 2e-19
Identities = 552/860 (64%), Gaps = 32/860 (4%)
Strand=Plus/Minus
Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862
|| ||||| ||||| || | || || ||||| || ||||| || | ||| || ||| |
Sbjct 24868965 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 24868906
Query 92863 TTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAAT 92920
| || | | | || ||| || ||| |||||||| ||| | |||
Sbjct 24868905 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 24868846
Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980
|| | ||||| || ||||| || || | | ||||| ||| | |||||| || | | |
Sbjct 24868845 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 24868786
Query 92981 CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTC--TCGATTACAACGGCTTCTTTCAAGA 93038
|| || ||||| ||| ||| || || | ||||| |||| || || |||| |
Sbjct 24868785 GCAACCGGCAGAGCATCG--CAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 24868728
Query 93039 TTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGC 93096
| | | || || || || | | | || |||| | || | |||| ||||| ||
Sbjct 24868727 TCCCCTTCACACT-CTCTTCGCTCAGCTTGTTGTTCAGCAGAGAA-TACAACAAGCAAGC 24868670
Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156
|| ||| ||| | ||||||||||| ||||| | ||| || || ||||| || ||
Sbjct 24868669 GAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGG 24868610
Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216
| || ||| || || || ||||| || || | | ||| || || || || || || ||
Sbjct 24868609 CATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATCCC 24868550
Query 93217 TTCCACGGCTGCAAATGCCA-CAATACGTTCGGCAAAA---TTTGCGGAATTACTGCTGA 93272
||| ||| ||||| || | |||| | ||||| ||| | || | || ||
Sbjct 24868549 TTCGACGCAAGCAAAAGCGATCAAT-CTCTCGGCGAAAGACTCTGAGCCAT------CGA 24868497
Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332
|||| || | ||||| ||||| || || | ||||| | || ||||| |||| ||
Sbjct 24868496 TCCACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAA 24868437
Query 93333 ATAGG-TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
| ||| ||| || || || || ||||| | |||| | || || |||||
Sbjct 24868436 AAAGGCGGCTCT-TTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATC 24868378
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
|| || |||| ||||| || || || ||||| |||||||| || || || | || |
Sbjct 24868377 TCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACC 24868318
Query 93452 TGCA-CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
|| | || ||| | ||| | | |||| || || ||| || || ||||| || ||
Sbjct 24868317 TGGACCTCCTTCATGAAA-CGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGC 24868259
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTT--ATCCCA 93567
|| || || | | || | | || || ||| || | ||| | || |||||
Sbjct 24868258 GAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCA 24868199
Query 93568 AT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
| ||||| ||||| |||||||| || ||| | ||||| ||||| || || ||
Sbjct 24868198 GTGGCGGAT--ATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCC 24868141
Query 93626 TTTTTGTACATATCCCATAT 93645
|| |||||||| ||||| ||
Sbjct 24868140 TTCTTGTACATCTCCCAGAT 24868121
Score = 111 bits (122), Expect = 2e-19
Identities = 552/860 (64%), Gaps = 32/860 (4%)
Strand=Plus/Plus
Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862
|| ||||| ||||| || | || || ||||| || ||||| || | ||| || ||| |
Sbjct 26602661 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 26602720
Query 92863 TTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAAT 92920
| || | | | || ||| || ||| |||||||| ||| | |||
Sbjct 26602721 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 26602780
Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980
|| | ||||| || ||||| || || | | ||||| ||| | |||||| || | | |
Sbjct 26602781 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 26602840
Query 92981 CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTC--TCGATTACAACGGCTTCTTTCAAGA 93038
|| || ||||| ||| ||| || || | ||||| |||| || || |||| |
Sbjct 26602841 GCAACCGGCAGAGCATCG--CAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 26602898
Query 93039 TTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGC 93096
| | | || || || || | | | || |||| | || | |||| ||||| ||
Sbjct 26602899 TCCCCTTCACACT-CTCTTCGCTCAGCTTGTTGTTCAGCAGAGAA-TACAACAAGCAAGC 26602956
Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156
|| ||| ||| | ||||||||||| ||||| | ||| || || ||||| || ||
Sbjct 26602957 GAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGG 26603016
Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216
| || ||| || || || ||||| || || | | ||| || || || || || || ||
Sbjct 26603017 CATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATCCC 26603076
Query 93217 TTCCACGGCTGCAAATGCCA-CAATACGTTCGGCAAAA---TTTGCGGAATTACTGCTGA 93272
||| ||| ||||| || | |||| | ||||| ||| | || | || ||
Sbjct 26603077 TTCGACGCAAGCAAAAGCGATCAAT-CTCTCGGCGAAAGACTCTGAGCCAT------CGA 26603129
Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332
|||| || | ||||| ||||| || || | ||||| | || ||||| |||| ||
Sbjct 26603130 TCCACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAA 26603189
Query 93333 ATAGG-TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
| ||| ||| || || || || ||||| | |||| | || || |||||
Sbjct 26603190 AAAGGCGGCTCT-TTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATC 26603248
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
|| || |||| ||||| || || || ||||| |||||||| || || || | || |
Sbjct 26603249 TCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACC 26603308
Query 93452 TGCA-CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
|| | || ||| | ||| | | |||| || || ||| || || ||||| || ||
Sbjct 26603309 TGGACCTCCTTCATGAAA-CGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGC 26603367
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTT--ATCCCA 93567
|| || || | | || | | || || ||| || | ||| | || |||||
Sbjct 26603368 GAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCA 26603427
Query 93568 AT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
| ||||| ||||| |||||||| || ||| | ||||| ||||| || || ||
Sbjct 26603428 GTGGCGGAT--ATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCC 26603485
Query 93626 TTTTTGTACATATCCCATAT 93645
|| |||||||| ||||| ||
Sbjct 26603486 TTCTTGTACATCTCCCAGAT 26603505
>seq7
Length=151357931
Score = 96.9 bits (106), Expect = 4e-15
Identities = 88/109 (81%), Gaps = 8/109 (7%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| |||||||||||||||||||| |||| | ||| |||||| ||||| ||
Sbjct 63573898 CAGTCAGGATGGCCGAGTGGTCTAAGGCGACAGACTCAAGTTCTGGT--CCTCGTGAGAG 63573841
Query 126321 -GCGTGGGTTCGAACCCCACACCTGAC--AAATTATTATTGGAATTTTT 126366
|||||||||| || ||||| ||||| |||||||| || || |||||
Sbjct 63573840 GGCGTGGGTTCAAATCCCACTTCTGACAAAAATTATTTTTCGATTTTTT 63573792
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/88 (82%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | |||
Sbjct 133028888 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGCG 133028947
Query 126324 TGGGTTCGAACCCCACACCTGACAAATT 126351
||||||| || ||||| ||||||||||
Sbjct 133028948 TGGGTTCAAATCCCACTTCTGACAAATT 133028975
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/88 (82%), Gaps = 6/88 (7%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| ||
Sbjct 137428197 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAG 137428254
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 137428255 GGCGTGGGTTCAAATCCCACTTCTGACA 137428282
>seq5
Length=131469567
Score = 87.8 bits (96), Expect = 2e-12
Identities = 72/87 (83%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324
|| ||| |||||||||||||||||||||||||||||| | |||||| || | ||||
Sbjct 13332100 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGGAAGGGCGT 13332157
Query 126325 GGGTTCGAACCCCACACCTGACAAATT 126351
|||||| || |||||| ||| ||||||
Sbjct 13332158 GGGTTCAAATCCCACAGCTGTCAAATT 13332184
>seq10
Length=73452336
Score = 86.0 bits (94), Expect = 7e-12
Identities = 72/87 (83%), Gaps = 6/87 (7%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 58747412 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 58747355
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 58747354 GCGTGGGTTCAAATCCCACTTCTGACA 58747328
Score = 86.0 bits (94), Expect = 7e-12
Identities = 77/94 (82%), Gaps = 7/94 (7%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| ||
Sbjct 59630131 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAG 59630074
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAA-ATTA 126352
|||||||||| || ||||| ||||||| ||||
Sbjct 59630073 GGCGTGGGTTCAAATCCCACTTCTGACAACATTA 59630040
Score = 86.0 bits (94), Expect = 7e-12
Identities = 75/91 (82%), Gaps = 3/91 (3%)
Strand=Plus/Plus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 69261778 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 69261835
Query 126328 TTCGAACCCCACACCTGACAA-ATTATTATT 126357
||| || |||||| ||| ||| | |||||||
Sbjct 69261836 TTCAAATCCCACAGCTGTCAACAATATTATT 69261866
>seq8
Length=131339754
Score = 86.0 bits (94), Expect = 7e-12
Identities = 72/87 (83%), Gaps = 6/87 (7%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 128881529 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 128881472
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 128881471 GCGTGGGTTCAAATCCCACTTCTGACA 128881445
>seq4
Length=146560859
Score = 86.0 bits (94), Expect = 7e-12
Identities = 73/89 (82%), Gaps = 6/89 (7%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| ||
Sbjct 65922541 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAG 65922484
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||| || ||||| |||||||
Sbjct 65922483 GGCGTGGGTTCAAATCCCACTTCTGACAA 65922455
>seq3
Length=113259003
Score = 86.0 bits (94), Expect = 7e-12
Identities = 72/87 (83%), Gaps = 6/87 (7%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 20945001 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 20945058
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 20945059 GCGTGGGTTCAAATCCCACTTCTGACA 20945085
>seq1
Length=132393784
Score = 86.0 bits (94), Expect = 7e-12
Identities = 73/89 (82%), Gaps = 2/89 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324
|| ||| |||||||||||||||||||||||||||||| | |||||| || | ||||
Sbjct 111693677 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 111693620
Query 126325 GGGTTCGAACCCCACACCTGACAAATTAT 126353
|||||| || |||||| ||| ||| ||||
Sbjct 111693619 GGGTTCAAATCCCACAGCTGTCAATTTAT 111693591
>seq9
Length=68543460
Score = 82.4 bits (90), Expect = 8e-11
Identities = 71/86 (83%), Gaps = 3/86 (3%)
Strand=Plus/Plus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 1097720 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 1097777
Query 126328 TTCGAACCCCACACCTGACA-AATTA 126352
||| || |||||| ||| || |||||
Sbjct 1097778 TTCAAATCCCACAGCTGTCACAATTA 1097803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556778718718080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |