Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 seq7 96.9 4e-15 seq5 87.8 2e-12 seq10 86.0 7e-12 seq8 86.0 7e-12 seq4 86.0 7e-12 seq3 86.0 7e-12 seq1 86.0 7e-12 seq9 82.4 8e-11 >seq2 Length=84732013 Score = 111 bits (122), Expect = 2e-19 Identities = 552/860 (64%), Gaps = 32/860 (4%) Strand=Plus/Minus Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || ||||| ||||| || | || || ||||| || ||||| || | ||| || ||| | Sbjct 24868965 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 24868906 Query 92863 TTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAAT 92920 | || | | | || ||| || ||| |||||||| ||| | ||| Sbjct 24868905 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 24868846 Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 || | ||||| || ||||| || || | | ||||| ||| | |||||| || | | | Sbjct 24868845 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 24868786 Query 92981 CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTC--TCGATTACAACGGCTTCTTTCAAGA 93038 || || ||||| ||| ||| || || | ||||| |||| || || |||| | Sbjct 24868785 GCAACCGGCAGAGCATCG--CAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 24868728 Query 93039 TTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGC 93096 | | | || || || || | | | || |||| | || | |||| ||||| || Sbjct 24868727 TCCCCTTCACACT-CTCTTCGCTCAGCTTGTTGTTCAGCAGAGAA-TACAACAAGCAAGC 24868670 Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156 || ||| ||| | ||||||||||| ||||| | ||| || || ||||| || || Sbjct 24868669 GAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGG 24868610 Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216 | || ||| || || || ||||| || || | | ||| || || || || || || || Sbjct 24868609 CATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATCCC 24868550 Query 93217 TTCCACGGCTGCAAATGCCA-CAATACGTTCGGCAAAA---TTTGCGGAATTACTGCTGA 93272 ||| ||| ||||| || | |||| | ||||| ||| | || | || || Sbjct 24868549 TTCGACGCAAGCAAAAGCGATCAAT-CTCTCGGCGAAAGACTCTGAGCCAT------CGA 24868497 Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332 |||| || | ||||| ||||| || || | ||||| | || ||||| |||| || Sbjct 24868496 TCCACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAA 24868437 Query 93333 ATAGG-TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 | ||| ||| || || || || ||||| | |||| | || || ||||| Sbjct 24868436 AAAGGCGGCTCT-TTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATC 24868378 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || || |||| ||||| || || || ||||| |||||||| || || || | || | Sbjct 24868377 TCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACC 24868318 Query 93452 TGCA-CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 || | || ||| | ||| | | |||| || || ||| || || ||||| || || Sbjct 24868317 TGGACCTCCTTCATGAAA-CGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGC 24868259 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTT--ATCCCA 93567 || || || | | || | | || || ||| || | ||| | || ||||| Sbjct 24868258 GAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCA 24868199 Query 93568 AT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 | ||||| ||||| |||||||| || ||| | ||||| ||||| || || || Sbjct 24868198 GTGGCGGAT--ATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCC 24868141 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| ||||| || Sbjct 24868140 TTCTTGTACATCTCCCAGAT 24868121 Score = 111 bits (122), Expect = 2e-19 Identities = 552/860 (64%), Gaps = 32/860 (4%) Strand=Plus/Plus Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || ||||| ||||| || | || || ||||| || ||||| || | ||| || ||| | Sbjct 26602661 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 26602720 Query 92863 TTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAAT 92920 | || | | | || ||| || ||| |||||||| ||| | ||| Sbjct 26602721 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 26602780 Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 || | ||||| || ||||| || || | | ||||| ||| | |||||| || | | | Sbjct 26602781 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 26602840 Query 92981 CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTC--TCGATTACAACGGCTTCTTTCAAGA 93038 || || ||||| ||| ||| || || | ||||| |||| || || |||| | Sbjct 26602841 GCAACCGGCAGAGCATCG--CAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 26602898 Query 93039 TTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGC 93096 | | | || || || || | | | || |||| | || | |||| ||||| || Sbjct 26602899 TCCCCTTCACACT-CTCTTCGCTCAGCTTGTTGTTCAGCAGAGAA-TACAACAAGCAAGC 26602956 Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156 || ||| ||| | ||||||||||| ||||| | ||| || || ||||| || || Sbjct 26602957 GAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGG 26603016 Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216 | || ||| || || || ||||| || || | | ||| || || || || || || || Sbjct 26603017 CATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATCCC 26603076 Query 93217 TTCCACGGCTGCAAATGCCA-CAATACGTTCGGCAAAA---TTTGCGGAATTACTGCTGA 93272 ||| ||| ||||| || | |||| | ||||| ||| | || | || || Sbjct 26603077 TTCGACGCAAGCAAAAGCGATCAAT-CTCTCGGCGAAAGACTCTGAGCCAT------CGA 26603129 Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332 |||| || | ||||| ||||| || || | ||||| | || ||||| |||| || Sbjct 26603130 TCCACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAA 26603189 Query 93333 ATAGG-TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 | ||| ||| || || || || ||||| | |||| | || || ||||| Sbjct 26603190 AAAGGCGGCTCT-TTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATC 26603248 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || || |||| ||||| || || || ||||| |||||||| || || || | || | Sbjct 26603249 TCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACC 26603308 Query 93452 TGCA-CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 || | || ||| | ||| | | |||| || || ||| || || ||||| || || Sbjct 26603309 TGGACCTCCTTCATGAAA-CGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGC 26603367 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTT--ATCCCA 93567 || || || | | || | | || || ||| || | ||| | || ||||| Sbjct 26603368 GAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCA 26603427 Query 93568 AT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 | ||||| ||||| |||||||| || ||| | ||||| ||||| || || || Sbjct 26603428 GTGGCGGAT--ATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCC 26603485 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| ||||| || Sbjct 26603486 TTCTTGTACATCTCCCAGAT 26603505 >seq7 Length=151357931 Score = 96.9 bits (106), Expect = 4e-15 Identities = 88/109 (81%), Gaps = 8/109 (7%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| |||||||||||||||||||| |||| | ||| |||||| ||||| || Sbjct 63573898 CAGTCAGGATGGCCGAGTGGTCTAAGGCGACAGACTCAAGTTCTGGT--CCTCGTGAGAG 63573841 Query 126321 -GCGTGGGTTCGAACCCCACACCTGAC--AAATTATTATTGGAATTTTT 126366 |||||||||| || ||||| ||||| |||||||| || || ||||| Sbjct 63573840 GGCGTGGGTTCAAATCCCACTTCTGACAAAAATTATTTTTCGATTTTTT 63573792 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | ||| Sbjct 133028888 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGCG 133028947 Query 126324 TGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||| || ||||| |||||||||| Sbjct 133028948 TGGGTTCAAATCCCACTTCTGACAAATT 133028975 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/88 (82%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 137428197 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAG 137428254 Query 126321 -GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 137428255 GGCGTGGGTTCAAATCCCACTTCTGACA 137428282 >seq5 Length=131469567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 13332100 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGGAAGGGCGT 13332157 Query 126325 GGGTTCGAACCCCACACCTGACAAATT 126351 |||||| || |||||| ||| |||||| Sbjct 13332158 GGGTTCAAATCCCACAGCTGTCAAATT 13332184 >seq10 Length=73452336 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 58747412 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 58747355 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 58747354 GCGTGGGTTCAAATCCCACTTCTGACA 58747328 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/94 (82%), Gaps = 7/94 (7%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 59630131 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAG 59630074 Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAA-ATTA 126352 |||||||||| || ||||| ||||||| |||| Sbjct 59630073 GGCGTGGGTTCAAATCCCACTTCTGACAACATTA 59630040 Score = 86.0 bits (94), Expect = 7e-12 Identities = 75/91 (82%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 69261778 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 69261835 Query 126328 TTCGAACCCCACACCTGACAA-ATTATTATT 126357 ||| || |||||| ||| ||| | ||||||| Sbjct 69261836 TTCAAATCCCACAGCTGTCAACAATATTATT 69261866 >seq8 Length=131339754 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 128881529 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 128881472 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 128881471 GCGTGGGTTCAAATCCCACTTCTGACA 128881445 >seq4 Length=146560859 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 6/89 (7%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 65922541 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAG 65922484 Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||| || ||||| ||||||| Sbjct 65922483 GGCGTGGGTTCAAATCCCACTTCTGACAA 65922455 >seq3 Length=113259003 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 20945001 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 20945058 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 20945059 GCGTGGGTTCAAATCCCACTTCTGACA 20945085 >seq1 Length=132393784 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 111693677 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 111693620 Query 126325 GGGTTCGAACCCCACACCTGACAAATTAT 126353 |||||| || |||||| ||| ||| |||| Sbjct 111693619 GGGTTCAAATCCCACAGCTGTCAATTTAT 111693591 >seq9 Length=68543460 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/86 (83%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 1097720 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 1097777 Query 126328 TTCGAACCCCACACCTGACA-AATTA 126352 ||| || |||||| ||| || ||||| Sbjct 1097778 TTCAAATCCCACAGCTGTCACAATTA 1097803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556778718718080