Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq8 87.8 4e-12
seq7 87.8 4e-12
seq5 87.8 4e-12
seq4 87.8 4e-12
seq3 87.8 4e-12
seq1 87.8 4e-12
seq6 86.0 1e-11
>seq8
Length=131339754
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 129377634 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 129377693
Query 142563 CCCCAC 142568
||||||
Sbjct 129377694 CCCCAC 129377699
>seq7
Length=151357931
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 18543858 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 18543917
Query 142563 CCCCAC 142568
||||||
Sbjct 18543918 CCCCAC 18543923
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 54565702 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 54565761
Query 142563 CCCCAC 142568
||||||
Sbjct 54565762 CCCCAC 54565767
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 118579584 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 118579525
Query 142563 CCCCAC 142568
||||||
Sbjct 118579524 CCCCAC 118579519
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 141903825 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 141903884
Query 142563 CCCCAC 142568
||||||
Sbjct 141903885 CCCCAC 141903890
>seq5
Length=131469567
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 108045124 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 108045065
Query 142563 CCCCAC 142568
||||||
Sbjct 108045064 CCCCAC 108045059
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 108050251 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 108050192
Query 142563 CCCCAC 142568
||||||
Sbjct 108050191 CCCCAC 108050186
>seq4
Length=146560859
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 41377878 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 41377937
Query 142563 CCCCAC 142568
||||||
Sbjct 41377938 CCCCAC 41377943
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 63062402 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 63062343
Query 142563 CCCCAC 142568
||||||
Sbjct 63062342 CCCCAC 63062337
>seq3
Length=113259003
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 4263440 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4263499
Query 142563 CCCCAC 142568
||||||
Sbjct 4263500 CCCCAC 4263505
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||||
Sbjct 52586968 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 52586909
Query 142564 CCCAC 142568
|||||
Sbjct 52586908 CCCAC 52586904
>seq1
Length=132393784
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 1404640 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1404581
Query 142563 CCCCAC 142568
||||||
Sbjct 1404580 CCCCAC 1404575
>seq6
Length=78779235
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||||
Sbjct 4790514 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4790455
Query 142564 CCCAC 142568
|||||
Sbjct 4790454 CCCAC 4790450
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||||
Sbjct 75711820 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 75711879
Query 142564 CCCAC 142568
|||||
Sbjct 75711880 CCCAC 75711884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027681509277072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |