Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 194 3e-44 >seq2 Length=84732013 Score = 194 bits (214), Expect = 3e-44 Identities = 383/560 (68%), Gaps = 10/560 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||||||||||||| | || || Sbjct 24868121 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGGTCGATCTC 24868180 Query 42360 -GCCAAGGACACGGCCGGCTGGGAGTCA---CTGTCTGAGAACGAAAAGTTTTTCCTCAA 42415 |||||| | ||| |||||| | || | | |||| ||| ||| Sbjct 24868181 AGCCAAGATATCCGCCA-CTGGGACCAAACCCTAACCGCCGACGAGCGCCACTTCGTCAC 24868239 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || ||||||||||||||||| |||||||| ||| |||||||| ||| | | Sbjct 24868240 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTGGAGAACCTCGCCGGCCG 24868299 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||||||| ||||| ||| | ||||| | |||||||||||||||||| ||||| Sbjct 24868300 TTTCATGAAGGAGGTCCAGGTCGCCGAGGCCAGGGCCTTCTACGGCTTCCAGATCGCCAT 24868359 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||||| | || ||| | | |||||| ||| ||| Sbjct 24868360 CGAGAACATCCACTCCGAGATGTACTCGCTTCTCCTCGAATCCTACATCAAGGACTCCGA 24868419 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 || | | | || || | ||||| ||||| || || ||| || |||||||| || Sbjct 24868420 TGAAAAGAGCCGCCTTTTTCACGCCATCGAGACCATCCCTTGCGTCGCCAAGAAGGCCGA 24868479 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 |||||||| || |||||||| | | || | |||| |||||| || | || || Sbjct 24868480 GTGGGCGCTGAAGTGGATCGATGGCTCAGA---GTCTTTCGCCGAGAGATTGATCGCTTT 24868536 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCT-CGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | | |||||| || || ||||||| |||| || || | |||| |||||||| || Sbjct 24868537 TGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAGCTTTTG-TGCCATTTTCTGGCTTAAAA 24868595 Query 42775 AGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 || | | |||||| || | ||||| || ||||| ||||| | ||||| || | Sbjct 24868596 AGCGCGGATTGATGCCGGGGTTAACCTTTTCAAACGAGCTCATATCTCGAGACGAAGGCC 24868655 Query 42835 TGCATAGGGACTTTGCCTGC 42854 | ||| | || || || ||| Sbjct 24868656 TCCATTGCGATTTCGCTTGC 24868675 Score = 194 bits (214), Expect = 3e-44 Identities = 383/560 (68%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||||||||||||| | || || Sbjct 26603505 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGGTCGATCTC 26603446 Query 42360 -GCCAAGGACACGGCCGGCTGGGAGTCA---CTGTCTGAGAACGAAAAGTTTTTCCTCAA 42415 |||||| | ||| |||||| | || | | |||| ||| ||| Sbjct 26603445 AGCCAAGATATCCGCCA-CTGGGACCAAACCCTAACCGCCGACGAGCGCCACTTCGTCAC 26603387 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || ||||||||||||||||| |||||||| ||| |||||||| ||| | | Sbjct 26603386 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTGGAGAACCTCGCCGGCCG 26603327 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||||||| ||||| ||| | ||||| | |||||||||||||||||| ||||| Sbjct 26603326 TTTCATGAAGGAGGTCCAGGTCGCCGAGGCCAGGGCCTTCTACGGCTTCCAGATCGCCAT 26603267 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||||| | || ||| | | |||||| ||| ||| Sbjct 26603266 CGAGAACATCCACTCCGAGATGTACTCGCTTCTCCTCGAATCCTACATCAAGGACTCCGA 26603207 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 || | | | || || | ||||| ||||| || || ||| || |||||||| || Sbjct 26603206 TGAAAAGAGCCGCCTTTTTCACGCCATCGAGACCATCCCTTGCGTCGCCAAGAAGGCCGA 26603147 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 |||||||| || |||||||| | | || | |||| |||||| || | || || Sbjct 26603146 GTGGGCGCTGAAGTGGATCGATGGCTCAGA---GTCTTTCGCCGAGAGATTGATCGCTTT 26603090 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCT-CGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | | |||||| || || ||||||| |||| || || | |||| |||||||| || Sbjct 26603089 TGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAGCTTTTG-TGCCATTTTCTGGCTTAAAA 26603031 Query 42775 AGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 || | | |||||| || | ||||| || ||||| ||||| | ||||| || | Sbjct 26603030 AGCGCGGATTGATGCCGGGGTTAACCTTTTCAAACGAGCTCATATCTCGAGACGAAGGCC 26602971 Query 42835 TGCATAGGGACTTTGCCTGC 42854 | ||| | || || || ||| Sbjct 26602970 TCCATTGCGATTTCGCTTGC 26602951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944200004401920