Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 9e-27
seq3 123 6e-23
seq6 114 3e-20
seq7 96.9 8e-15
>seq8
Length=131339754
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || || || || ||||||| ||| || |||||||| || ||||| ||
Sbjct 3135539 CCACCACGAAGCCTGAGCACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCT 3135598
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || |||||||||||||| || | ||| || |||
Sbjct 3135599 AGAGTGCGGCCATCCTCGAGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 3135658
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|||||||| || |||||||| || || || || || || || | ||| |||| ||
Sbjct 3135659 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTC---TCC 3135715
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct 3135716 ACCTCAAGAGTGATGGTCTTCCCCGTAAGAGTCTTCACGAAAATCTGCAT 3135765
Score = 107 bits (118), Expect = 5e-18
Identities = 169/238 (71%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||| || || || ||||| | ||| || |||||||| || ||||
Sbjct 3136219 CATG-CCTCCACGGAGCCTTAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGT 3136277
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||||||| || || || || || | || || || || || || || | ||| || |
Sbjct 3136278 CGGCGAGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTG---GT 3136334
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415
||||| || || || || ||||||||||| || || || || || || | || ||
Sbjct 3136335 CTGGGGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAGC 3136394
Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || |||||||| || || ||||||| |||||||| || ||||||||
Sbjct 3136395 TC---TCAACCTCAAGCGTGATGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
Score = 104 bits (114), Expect = 6e-17
Identities = 168/238 (71%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | ||| | || || || || | ||| || || ||||| || ||||
Sbjct 3136675 CATG-CCACCCCTGAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 3136733
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| ||||| || || || || || | ||| ||||||||||| || || | ||| || |
Sbjct 3136734 CAGCGAGAGTACGGCCATCCTCGAGTTGCTTTCCTGCGAAAATGAGCCTCTGCTG---GT 3136790
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415
|| ||||| || || || |||||||| || ||||| || || || |||| || ||
Sbjct 3136791 CTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATAGTGTCTGAGC 3136850
Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| ||||| || || || ||||| || || ||||||||
Sbjct 3136851 TC---TCCACCTCAAGGGTGATAGTCTTTCCTGTAAGTGTCTTCACAAAGATCTGCAT 3136905
Score = 100 bits (110), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || |||| ||| || || ||||| || || || ||
Sbjct 3135311 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 3135370
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || || || | || || ||||| ||||| || | ||| || |||
Sbjct 3135371 AGAGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGAGGG 3135430
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| ||||||||||| || || ||||| || || || | ||| |||| ||
Sbjct 3135431 ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATGGTATCCGAGCTC---TCC 3135487
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | |||||||||||||| || || ||||| || || ||||||||
Sbjct 3135488 ACCTCCAAAGTGATCGTCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 3135537
Score = 84.2 bits (92), Expect = 5e-11
Identities = 161/235 (69%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | ||| || ||||| | || || |||||||| |||||||
Sbjct 3136447 CATG-CCACCTCTTAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGT 3136505
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || || || || || || || | || || || || || || || | ||| ||
Sbjct 3136506 CAGCAAGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCG 3136565
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418
||||| || || || ||||||||||| || || || || || || | || ||||
Sbjct 3136566 GGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCGGAGCTC- 3136624
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || || || |||| |||||||| || ||||||||
Sbjct 3136625 --TCGACCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 3136677
>seq3
Length=113259003
Score = 123 bits (136), Expect = 6e-23
Identities = 147/197 (75%), Gaps = 12/197 (6%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| |||||||| ||||| || || || || || | || ||||| || |||
Sbjct 21885982 TCCTTCTGGATGTTATAGTCAGCGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAG 21886041
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || |||||| ||||| || || |||||||| || ||||| ||
Sbjct 21886042 ATCAGCCTCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCTTTTACA 21886098
Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | |||| ||| || || ||||| || ||||||||||| || || |||
Sbjct 21886099 TTGTCAATGGTATCGGAGCTC---TCAACCTCGAGAGTAATCGTCTTCCCAGTGAGGGTC 21886155
Query 288457 TTGACGAATATCTGCAT 288473
|||||||| ||||||||
Sbjct 21886156 TTGACGAAAATCTGCAT 21886172
Score = 105 bits (116), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | ||| || ||||||||||| || || |||
Sbjct 21886174 CCACCACGAAGACGGAGGACGAGGTGGAGTGTGGACTCCTTTTGGATATTGTAATCAGCG 21886233
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | ||||| || || |||||||| | || || | |||
Sbjct 21886234 AGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGGTCAGGGGGG 21886293
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || ||||||||||| ||||| || || || || | || ||| ||
Sbjct 21886294 ATCCCCTCCTTGTCCTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAACTC---TCG 21886350
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| || || || || || || || ||||||||
Sbjct 21886351 ACCTCGAGAGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 21886400
>seq6
Length=78779235
Score = 114 bits (126), Expect = 3e-20
Identities = 173/245 (71%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 288232 ATGATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGG 288291
|| ||||| | || ||||||||||| | ||| || || || | || || || ||
Sbjct 3704007 ATCATTCACATATCACCACCGCGGAGACGAAGCACAAGGTGGAGAGTAGACTCCTTCTGA 3703948
Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351
||||| || || || || || | || ||||| | || || ||||||||||||| | |
Sbjct 3703947 ATATTGTAATCAGCAAGAGTCCTCCCATCTTCAAGCTGCTTCCCTGCGAAGATCAACCTC 3703888
Query 288352 TGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAA 288411
|| ||| || || || || |||||||| || ||||| || ||||| || || |
Sbjct 3703887 TGCTGATCCGGCGGAATCCCCTCCTTATCCTGTATCTTCGCCTTGACGTTGTCGATCGTG 3703828
Query 288412 TC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468
|| |||| || || || | |||||||||||||| |||| |||||||| ||||||
Sbjct 3703827 TCAGAGCTC---TCCACCTCCAAGGTGATCGTCTTCCCCGTCAAGGTCTTGACAAATATC 3703771
Query 288469 TGCAT 288473
|||||
Sbjct 3703770 TGCAT 3703766
>seq7
Length=151357931
Score = 96.9 bits (106), Expect = 8e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| | ||||| ||||| | ||| ||||| || | || || || || ||
Sbjct 149813379 TTCGTTCTGGATGCTGTAGTCTGCGAGGGAGCGGCCGTCCTCCAGCTGCTTCCCAGCAAA 149813438
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| | ||||| | ||||| || || || |||||||| || || ||||||||
Sbjct 149813439 GATCAGCCTCTGTTTGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 149813498
Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| | | || |||| || | || || ||||| ||||| | ||| || |||||
Sbjct 149813499 GTCAGTGGTGTCCGAGCTC---TCGGCCTCCAGAGTGATGGTCTTTCTGGTGAGGGTCTT 149813555
Query 288459 GACGAATATCTGCAT 288473
|||||| ||||||||
Sbjct 149813556 GACGAAAATCTGCAT 149813570
Score = 96.9 bits (106), Expect = 8e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| | ||||| ||||| | ||| ||||| || | || || || || ||
Sbjct 149813661 TTCGTTCTGGATGCTGTAGTCTGCGAGGGAGCGGCCGTCCTCCAGCTGCTTCCCAGCAAA 149813720
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| | ||||| | ||||| || || || |||||||| || || ||||||||
Sbjct 149813721 GATCAGCCTCTGTTTGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 149813780
Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| | | || |||| || | || || ||||| ||||| | ||| || |||||
Sbjct 149813781 GTCAGTGGTGTCCGAGCTC---TCGGCCTCCAGAGTGATGGTCTTTCTGGTGAGGGTCTT 149813837
Query 288459 GACGAATATCTGCAT 288473
|||||| ||||||||
Sbjct 149813838 GACGAAAATCTGCAT 149813852
Score = 91.5 bits (100), Expect = 3e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || |||| | ||||| ||||| ||||| ||||| || | || || || || ||
Sbjct 149802547 TTCGTTCCGGATGCTGTAGTCTGCGAGGGTGCGGCCGTCCTCCAGCTGCTTCCCAGCAAA 149802606
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| | ||||| | ||||| || || || |||||||| || || ||||||||
Sbjct 149802607 GATCAGCCTCTGTTTGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 149802666
Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| | || |||| || | || || ||||| ||||| || || || |||||
Sbjct 149802667 GTCAGCGGTGTCCGAGCTC---TCGGCCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTT 149802723
Query 288459 GACGAATATCTGCAT 288473
|||||| ||||||||
Sbjct 149802724 GACGAAAATCTGCAT 149802738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179476171914976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |