Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 111 2e-19 seq8 95.1 1e-14 seq3 87.8 2e-12 >seq6 Length=78779235 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| | |||||| | ||| | | |||||||||| |||||||| |||||| Sbjct 3703309 GCCTCCACGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGC 3703250 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| ||||| || || || || | | |||| | | || ||||||||||| Sbjct 3703249 CAAAGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGG 3703190 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | || |||| ||| | Sbjct 3703189 AATGCCCTCCTTGTCTTGGATCTTAGCCTTGACATTG-TCAATAGTATCGGAGCTCTCGA 3703131 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | ||| | ||||| |||||||| || || ||||| ||||||||| Sbjct 3703130 CCTCCAACGTTATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCATG 3703081 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || | ||| || ||||||||||||||||||| | Sbjct 3703731 GACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCGGCCATCCTCGAGTTGTTTACCGGCA 3703672 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || || || ||||| ||| || || | Sbjct 3703671 AAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTGACG 3703612 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | ||| | || || || ||||| ||||| Sbjct 3703611 TTGTCGATGGTGTCAGAGCTCTCGACCTCCAACGTGATGGTCTTGCCGGTCAGGGTTTTG 3703552 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 3703551 ACGAAAATCTGCAT 3703538 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||| || | || || ||||| || ||||| || | Sbjct 3703047 GACTCCTTTTGGATGTTGTAATCCGCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCG 3702988 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| || ||||| ||||| || ||||| ||||| ||| ||| ||| | | Sbjct 3702987 AAGATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTTGCTTTAACA 3702928 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | || || ||||||| || | || || || || || ||||| Sbjct 3702927 TTG-TCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTT 3702869 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 3702868 CACAAAGATCTGCAT 3702854 >seq8 Length=131339754 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||||||| | |||||| ||||| || || || |||| | Sbjct 3136256 GACTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGACCATCCTCAAGCTGCTTCCCGGCA 3136315 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || | ||| ||||| || || || || || ||||| |||||| || | | Sbjct 3136316 AAAATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTGACA 3136375 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||| ||||| | ||| | ||||| || |||| || || Sbjct 3136376 TTG-TCGATTGTGTCAGAGCTCTCAACCTCAAGCGTGATGGTTTTGCCGGTCAAGGTCTT 3136434 Query 138600 TACAAAAATCTGCATG 138615 ||||||||||||||| Sbjct 3136435 GACAAAAATCTGCATG 3136450 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/201 (72%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 ||||||||||| |||||||| || ||| | || || |||||| || || || || | Sbjct 3136028 GACTCCTTTTGGATGTTGTAATCTGCT-AGGGTGCGGCCGTCCTCAAGCTGCTTCCCCGC 3136086 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT-- 138537 | | || || | ||| ||||| || || ||||| |||||||| ||| |||| | ||| Sbjct 3136087 AAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCTTTGTC-CTGAATTTTGGCTTTGA 3136145 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | ||||| | ||| ||||| | || | ||||| |||||||| || Sbjct 3136146 CATTG-TCGATTGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTTTTGCCAGTCAGTGTC 3136204 Query 138598 TTTACAAAAATCTGCATGGCT 138618 || || || ||||||||| || Sbjct 3136205 TTAACGAAGATCTGCATGCCT 3136225 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 ||||||||||| ||||||||||| ||| | ||| || |||||||| || || || | Sbjct 3135572 GACTCCTTTTGGATGTTGTAGTCTGCT-AGAGTGCGGCCATCCTCGAGCTGCTTTCCTGC 3135630 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 |||| || | ||| |||||||| || || ||||| ||||| ||| || || | Sbjct 3135631 GAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTAAC 3135690 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||| || | ||||||||| | || | || || || || ||||| | Sbjct 3135691 ATTG-TCAATGGTATCCGAGCTCTCCACCTCAAGAGTGATGGTCTTCCCCGTAAGAGTCT 3135749 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||||||||| Sbjct 3135750 TCACGAAAATCTGCAT 3135765 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || || | Sbjct 122668992 GACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCG 122669051 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 122669052 AAAATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACA 122669111 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||||| || | || || || || || ||||| Sbjct 122669112 TTG-TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTT 122669170 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 122669171 GACGAAGATCTGCATG 122669186 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| || | ||| | | |||||||| || || || | | Sbjct 3135344 GACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTCCCTGCA 3135403 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || | ||| ||||||||||| || ||||| || || ||| || || | | Sbjct 3135404 AAGATGAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACA 3135463 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| || | ||||||||| | || | ||| || || || || || || Sbjct 3135464 TTG-TCGATGGTATCCGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCTGTAAGGGTCTT 3135522 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 3135523 CACAAAAATCTGCAT 3135537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | ||| | || | ||| | | | ||||||||||| ||||| ||||| Sbjct 3136450 GCCACCTCTTAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGTCAGC 3136509 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||| || || || || | | | || || | ||| |||||||| || Sbjct 3136510 AAGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCGGGGG 3136569 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| |||||| || | |||| || | ||||||| ||| | Sbjct 3136570 GATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTG-TCGATTGTGTCGGAGCTCTCGA 3136628 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||||| || |||| || || ||||||||||||||| Sbjct 3136629 CCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGACAAAAATCTGCATG 3136678 >seq3 Length=113259003 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||||| ||||| || || || || | | Sbjct 21885067 GACTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGTCCATCCTCCAGCTGCTTGCCTGCA 21885126 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || | ||||||||||||||| || || || ||||| ||| || || | | Sbjct 21885127 AAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACA 21885186 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| ||||||||| | || | || || || || || || || Sbjct 21885187 TTG-TCAATCGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTT 21885245 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 21885246 CACAAAAATCTGCAT 21885260 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||| || || || || ||| ||||| || || || || | | Sbjct 21885295 GACTCCTTCTGAATGTTATAATCCGCCAACGTTCGCCCATCCTCAAGCTGCTTGCCAGCA 21885354 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || | ||| ||||| || || || || || ||||| ||| ||| ||| | | Sbjct 21885355 AAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCTTTCACA 21885414 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||||| |||||| || | || | || || || || || || || Sbjct 21885415 TTGT-CGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTT 21885473 Query 138600 TACAAAAATCTGCATGGCT 138618 ||||||||||||||| || Sbjct 21885474 AACAAAAATCTGCATGCCT 21885492 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | | | |||||||| || ||||| ||||| | || || ||||| Sbjct 21885964 ACCAAATGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCGAGGGTTCGGCCATCCTCA 21886023 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 || || || || | | |||| || | ||| ||||| || || || || || ||||| | Sbjct 21886024 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 21886083 Query 138526 ATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 || || ||||| ||||| | | ||| |||| ||| ||||||| || | ||| || Sbjct 21886084 ATCTTGGCTTTTACATTGT-CAATGGTATCGGAGCTCTCAACCTCGAGAGTAATCGTCTT 21886142 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || || || || ||||||||||| Sbjct 21886143 CCCAGTGAGGGTCTTGACGAAAATCTGCAT 21886172 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| || ||||| || | ||||| |||||| || ||||| |||| | Sbjct 21886207 GACTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCA 21886266 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | || ||||| || || || || || ||||| |||||| ||| | Sbjct 21886267 AAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGGATTTTGGCTTTGACA 21886326 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||||| || | || || || || || ||||| Sbjct 21886327 TTATCAATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTGCCTGTGAGGGTTTTC 21886386 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 21886387 ACAAAGATCTGCAT 21886400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496189250922240