Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq6 122 8e-23
seq3 100 3e-16
seq8 95.1 1e-14
seq9 87.8 2e-12
>seq6
Length=78779235
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| || ||||| | || ||||| || || |||||||| |||||||| |||||
Sbjct 3703539 ATTCCTCCACGCAGCCTGAGGACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCA 3703480
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || || || | ||||||||| ||| | || | | ||||||||||||
Sbjct 3703479 GCCAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGA 3703420
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || ||||| || || |||| || | || ||||| ||||
Sbjct 3703419 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCG 3703360
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| |||||||| || || ||||||||||||||
Sbjct 3703359 ACCTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || || ||||||||||| || ||||| | ||| ||| ||
Sbjct 3703062 ACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCCGCAAGGGTCCGGCCATCCTCA 3703003
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||||| || ||| | || | ||||||||||| || || || ||||| || || ||
Sbjct 3703002 AGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGG 3702943
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| ||| ||| | || | |||||| || || || || ||||| || | || |||
Sbjct 3702942 ATCTTTGCTTTAACATTGTCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTG 3702883
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||||||| ||||| ||||| || ||||||
Sbjct 3702882 CCGGTTAGTGTTTTCACAAAGATCTGCATC 3702853
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || |||||||| || |||||||| ||||| ||||| || || ||||| |||
Sbjct 3703311 ATGCCTCCACGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCG 3703252
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | || ||||| || | ||||| | ||||||||||||
Sbjct 3703251 GCCAAAGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGA 3703192
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || ||||| || || |||| || | || ||||| ||||
Sbjct 3703191 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCG 3703132
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | ||||| || || || || || ||||| || |||||
Sbjct 3703131 ACCTCCAACGTTATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082
>seq3
Length=113259003
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || |||||||||||||| ||||| || ||| || ||
Sbjct 21886192 ACGAGGTGGAGTGTGGACTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCA 21886251
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||||| || || | |||| || ||||||||| || || || || || || || ||
Sbjct 21886252 AGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGG 21886311
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
||||| ||||| || | |||||| ||| |||||| |||||||| | || |||
Sbjct 21886312 ATTTTGGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTG 21886371
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || ||||| ||||| || ||||||
Sbjct 21886372 CCTGTGAGGGTTTTCACAAAGATCTGCATC 21886401
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| | ||||||| ||| || || || || || ||||| ||||| ||||| ||
Sbjct 21885487 ATGCCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCA 21885546
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| ||| || | || || || || | ||||| | |||||||| ||
Sbjct 21885547 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGG 21885606
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || || || || || || ||| ||| | || | ||||||||| |||
Sbjct 21885607 GGGATTCCCTCCTTGTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCC 21885666
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||| | || ||||||||||| || || |||||||| |||||
Sbjct 21885667 ACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716
>seq8
Length=131339754
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||||||||| | | ||| || || || || || ||||| ||||| || || |||
Sbjct 122668959 CCTCCGCGGAGGCGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 122669018
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| || || | || ||||| ||| | || | || ||||||||||| ||
Sbjct 122669019 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGGCGCTGCTGGTCCGGGGGG 122669078
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || ||||| || || |||| || | ||||| || ||||||||
Sbjct 122669079 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 122669138
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || | || |||||||| || ||||| || || || |||||
Sbjct 122669139 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 122669185
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||| | ||| ||||| || || || ||||||||||| || || |||
Sbjct 3136220 ATGCCTCCACGGAGCCTTAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCG 3136279
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | ||| || | || || || || | || | | |||||||| ||
Sbjct 3136280 GCGAGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGG 3136339
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || || ||||| |||| || | ||||| || |||
Sbjct 3136340 GGAATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCA 3136399
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||||||||| | || || |||||||| |||||
Sbjct 3136400 ACCTCAAGCGTGATGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
>seq9
Length=68543460
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 45155 TTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAA 45214
|||||| | |||||| ||||||||| ||||||| ||| || || | ||||||
Sbjct 1094496 TTGGATGTCGTAATCGGCTACGGTTTTATCTTCGTCCAGTTGATTCCCGCCAAATATCAG 1094555
Query 45215 TCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTAC 45274
|| |||||||| |||| ||||||| || ||||| || | | ||| | || |
Sbjct 1094556 ACGCTGCTGGTCGACGGGAACCCCTTCTTGCTCCTGAATCTTGAGCTCGATATCGTCGAT 1094615
Query 45275 GGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAAT 45334
||||| ||| |||||||| || | ||| || ||| ||||||||||||||| ||
Sbjct 1094616 TCTGTCGCTGCTCTCCACTTCGAGGGTGATCGTCTTCTCGGATAGAGTTTTTACAAAGAT 1094675
Query 45335 TTGCAT 45340
|||||
Sbjct 1094676 CTGCAT 1094681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451936574728320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |