Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq8 123 3e-23
seq3 107 2e-18
seq6 105 8e-18
>seq8
Length=131339754
Score = 123 bits (136), Expect = 3e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||||| ||| || || |||| ||||||||||| || |||||
Sbjct 122668994 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAA 122669053
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||| | || | | ||||||||| |||||| ||||| |
Sbjct 122669054 AATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 122669113
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || || || || | |||||||| ||||| || || ||||| ||
Sbjct 122669114 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGAC 122669173
Query 46582 AAAGATTTGCATTTTG 46597
||||| ||||| |||
Sbjct 122669174 GAAGATCTGCATGTTG 122669189
Score = 111 bits (122), Expect = 2e-19
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| ||||| | || |||||||||||| |||||||||| ||||| || | || ||
Sbjct 3136240 CACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGACCATCCTC 3136299
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||| ||||| || || | | ||||||||| | || | || ||||||||||
Sbjct 3136300 AAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 3136359
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
||| || ||||| | | | ||||| |||| || || || | |||||||||
Sbjct 3136360 GATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTC---TCAACCTCAAGCGTGATGGT 3136416
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| |||| || || ||||| || |||||
Sbjct 3136417 TTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
Score = 96.9 bits (106), Expect = 4e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| ||||| | || |||||||||||| |||||||| | ||||||||| | || ||
Sbjct 3135556 CACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCTAGAGTGCGGCCATCCTC 3135615
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||| || ||||| || | | ||||||||| | || | | |||||||||
Sbjct 3135616 GAGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTG 3135675
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
|||||| ||| | | | | || || |||| ||||| || | ||||||||
Sbjct 3135676 GATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTC---TCCACCTCAAGAGTGATGGT 3135732
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || || || || || || |||||
Sbjct 3135733 CTTCCCCGTAAGAGTCTTCACGAAAATCTGCAT 3135765
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| ||||||| ||| | || ||||| | || |||||||||||| || ||||| |
Sbjct 3136449 TGCCACCTCTTAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGTCAG 3136508
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|| || || | || || |||||||| || || || || | | ||||||||| | |
Sbjct 3136509 CAAGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCGGGG 3136568
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATT 46541
| | || |||||||||| ||| || ||||| | | | ||||| |||| |
Sbjct 3136569 GGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCGGAGCTC---T 3136625
Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || | ||||||||||| || |||| || || ||||| || |||||
Sbjct 3136626 CGACCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 3136677
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||| || | || || || |||| || |||||||| || |||||
Sbjct 3135802 CTCCTTTTGGATGTTGTAATCTGCAAGGGTTCGGCCGTCCTCAAGCTGCTTCCCAGCGAA 3135861
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | |||||| || | || | || |||||| ||| ||||| ||||| |
Sbjct 3135862 GATGAGCCTCTGCTGATCCGGGGGGATGCCCTCCTTATCCTGTATCTTGGCCTTGACATT 3135921
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | || || |||| ||||| |||| || |||||||| || ||||| || ||
Sbjct 3135922 GTCGATTGTATCCGAGCTC---TCCACCTCCAAGGTAATGGTTTTTCCTGTCAGGGTCTT 3135978
Query 46579 AACAAAGATTTGCAT 46593
||| || ||||||||
Sbjct 3135979 AACGAAAATTTGCAT 3135993
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||| || | ||| ||||| |||| || |||||||| || || ||
Sbjct 3136030 CTCCTTTTGGATGTTGTAATCTGCTAGGGTGCGGCCGTCCTCAAGCTGCTTCCCCGCAAA 3136089
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||||||||| | || | | ||| |||||| || || |||| |
Sbjct 3136090 AATGAGCCTCTGCTGGTCTGGGGGGATACCCTCTTTGTCCTGAATTTTGGCTTTGACATT 3136149
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || || | |||||||||||||| ||||| || ||
Sbjct 3136150 GTCGATTGTGTCAGAGCTC---TCGACCTCAAGGGTGATGGTTTTGCCAGTCAGTGTCTT 3136206
Query 46579 AACAAAGATTTGCAT 46593
||| ||||| |||||
Sbjct 3136207 AACGAAGATCTGCAT 3136221
>seq3
Length=113259003
Score = 107 bits (118), Expect = 2e-18
Identities = 156/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | |||||| || | ||| |||||| ||||| |||||||| | || || || |
Sbjct 21885045 ACGAAGCACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGTCC 21885104
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || ||||||||||| || || |||| | ||| ||||| | || | | ||||||
Sbjct 21885105 ATCCTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTT 21885164
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554
|||| ||||||| ||| | | | | |||||| |||| ||||| |||| ||
Sbjct 21885165 GTCCTGGATCTTCGCCTTCACATTGTCAATCGTGTCGGAGCTC---TCCACCTCCAGGGT 21885221
Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| ||||| || || || || ||||| || |||||
Sbjct 21885222 GATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 21885260
Score = 107 bits (118), Expect = 2e-18
Identities = 166/233 (71%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| || | | || ||| || || | || |||||| ||||| || ||||| |
Sbjct 21885488 TGCCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAG 21885547
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|| ||||| | || || |||||||||||||| || ||||| | ||||||||| | |
Sbjct 21885548 CGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGG 21885607
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540
| | | |||||||||| |||||| | ||| | | | | | ||||| ||||
Sbjct 21885608 GGATTCCCTCCTTGTCCTGGATCTT-TGCTTTCACATTGTCGATGGTGTCGGAGCTC--- 21885663
Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| |||| |||||||| ||||| || || || || ||||| || |||||
Sbjct 21885664 TCCACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||||||||| || | || || || |||| || ||||| |||||||| ||
Sbjct 21886209 CTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCAAA 21886268
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| | |||||||| | || | | |||||||||| ||| || |||| |
Sbjct 21886269 GATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGGATTTTGGCTTTGACATT 21886328
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| ||| || || || | |||||||| ||||| || || |||||
Sbjct 21886329 ATCAATGGTGTCAGAACTC---TCGACCTCGAGAGTGATGGTCTTGCCTGTGAGGGTTTT 21886385
Query 46579 AACAAAGATTTGCAT 46593
|||||||| |||||
Sbjct 21886386 CACAAAGATCTGCAT 21886400
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || || || || | | || ||| | || || ||||||||||| || ||
Sbjct 21885297 CTCCTTCTGAATGTTATAATCCGCCAACGTTCGCCCATCCTCAAGCTGCTTGCCAGCAAA 21885356
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||||||||| | || | | |||||||||| |||||| | ||| | |
Sbjct 21885357 GATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTT-TGCTTTCACAT 21885415
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||| |||| ||||| |||| |||||||| ||||| || || || |
Sbjct 21885416 TGTCGATGGTGTCGGAGCTC---TCCACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCT 21885472
Query 46578 TAACAAAGATTTGCAT 46593
||||||| || |||||
Sbjct 21885473 TAACAAAAATCTGCAT 21885488
>seq6
Length=78779235
Score = 105 bits (116), Expect = 8e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || || | ||| | || ||||| | ||| |||||||||||| ||||| || |
Sbjct 3703082 TGCCACCCCTGAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCCG 3703023
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
|| || || | || || ||||| ||||| ||||| || | || |||||||||| |
Sbjct 3703022 CAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAG 3702963
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543
| | | ||||||||| |||||| | ||| | | | | | | ||||| |||||
Sbjct 3702962 GGATCCCTTCCTTGTCCTGGATCTT-TGCTTTAACATTGTCGATGGTGTCAGAGGATTCA 3702904
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | ||||| || ||||| || || ||||| |||||||| |||||
Sbjct 3702903 ACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCACAAAGATCTGCAT 3702854
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||||||||| || | ||||| || |||| ||||| || || || |||||
Sbjct 3703500 TCCTTCTGGATATTGTAATCAGCCAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAG 3703441
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | | |||||||| | || | || ||||||||| |||||| ||||| |
Sbjct 3703440 ATAAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTA 3703381
Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579
| | || || |||| || || |||| ||||||||||| || || || || ||
Sbjct 3703380 TCAATAGTATCGGAGCTC---TCGACCTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTG 3703324
Query 46580 ACAAAGATTTGCAT 46593
||||| ||||||||
Sbjct 3703323 ACAAAAATTTGCAT 3703310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565155083859840
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