Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 122 1e-22 seq7 91.5 2e-13 >seq8 Length=131339754 Score = 122 bits (134), Expect = 1e-22 Identities = 236/339 (70%), Gaps = 12/339 (4%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCA 15974 ||| ||||||||| | ||||| || || |||| |||| || || || ||| || | Sbjct 3127968 ATCTAGGATATCAGCACGATTGGTAGCTGCGACCACAATAACCCCGGTATTTCCTT--CG 3128025 Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 |||||||||||||| || |||||||| || | ||| ||||| | ||| |||||| || Sbjct 3128026 AAACCATCCATCTCGGTTAAAAGCTGATTGAGAGTCTGTTCTCTTTCGTCATTCCCTCCG 3128085 Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 | |||| | | ||| | || || |||||||||||||||| || || ||||| Sbjct 3128086 CCAATTCCAGTTCCTCTTTGTCTCCCAACAGCATCAATCTCATCAACAAATACAATGCAA 3128145 Query 16095 GGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCA 16151 ||| ||| || | | ||| ||| ||||| || || |||| || || || ||| Sbjct 3128146 GGTGCATTCTCTTTTGCCTTCTTGAAA-AGATCACG--AACTCTTGAAGCACCAACTCCA 3128202 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210 ||||||||||||||||| | | | ||| |||| || || || || || |||||| Sbjct 3128203 ACAAACATCTCCACAAACTCCGATCCTGAA-ATTGAGAAAAATGGAACGCCAGCTTCACC 3128261 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 || || || || || | |||||| || || ||||| Sbjct 3128262 AGCTATTGCCTTTGCAAGCAAAGTCTTTCCAGTTCCTGG 3128300 >seq7 Length=151357931 Score = 91.5 bits (100), Expect = 2e-13 Identities = 216/322 (67%), Gaps = 16/322 (5%) Strand=Plus/Plus Query 15936 TTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTGTCA 15993 || ||||| |||| |||| || || |||| | | | || ||||||||||| |||| Sbjct 78779690 TTTGTTGCCGCGAGCACAATAACCCCGCTGTTCCCTGAG--AATCCATCCATCTCCGTCA 78779747 Query 15994 AAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCG 16051 | |||||||| ||||| || |||| ||||||||| || | | | | || || | | Sbjct 78779748 ACAGCTGGTTTATAGTCTGCTCCCTCTCATCATTCCCT--CCTCCAAGCCCCGCCCCTCT 78779805 Query 16052 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGC 16107 ||| | || || |||||||||||||| ||||| || || || || || |||||| Sbjct 78779806 CTGCCTCCCAACTGCATCAATCTCATCGATGAACACAATACAGGGTGCCTTAGATTTCGC 78779865 Query 16108 GAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAA 16167 | || || | ||||| || | ||| |||||||||||||||| || || | Sbjct 78779866 CTTC----TCGAATAAATCCCTAACCCTAGAGGCTCCCACACCAACAAACAATTCGACGA 78779921 Query 16168 AGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227 | | | || | |||| | ||| || || | || || || | || ||||| | Sbjct 78779922 ATTCGGATGCTGCACATGAAAAGAACGGCACTCCGGCCTCTCCGGCCACAGCCCGGGCTA 78779981 Query 16228 GAAGAGTCTTACCCGTACCTGG 16249 ||| ||||| ||||| || || Sbjct 78779982 AAAGGGTCTTCCCCGTCCCAGG 78780003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620650902570240