Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq8 122 1e-22
seq7 91.5 2e-13
>seq8
Length=131339754
Score = 122 bits (134), Expect = 1e-22
Identities = 236/339 (70%), Gaps = 12/339 (4%)
Strand=Plus/Plus
Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCA 15974
||| ||||||||| | ||||| || || |||| |||| || || || ||| || |
Sbjct 3127968 ATCTAGGATATCAGCACGATTGGTAGCTGCGACCACAATAACCCCGGTATTTCCTT--CG 3128025
Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034
|||||||||||||| || |||||||| || | ||| ||||| | ||| |||||| ||
Sbjct 3128026 AAACCATCCATCTCGGTTAAAAGCTGATTGAGAGTCTGTTCTCTTTCGTCATTCCCTCCG 3128085
Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094
| |||| | | ||| | || || |||||||||||||||| || || |||||
Sbjct 3128086 CCAATTCCAGTTCCTCTTTGTCTCCCAACAGCATCAATCTCATCAACAAATACAATGCAA 3128145
Query 16095 GGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCA 16151
||| ||| || | | ||| ||| ||||| || || |||| || || || |||
Sbjct 3128146 GGTGCATTCTCTTTTGCCTTCTTGAAA-AGATCACG--AACTCTTGAAGCACCAACTCCA 3128202
Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210
||||||||||||||||| | | | ||| |||| || || || || || ||||||
Sbjct 3128203 ACAAACATCTCCACAAACTCCGATCCTGAA-ATTGAGAAAAATGGAACGCCAGCTTCACC 3128261
Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249
|| || || || || | |||||| || || |||||
Sbjct 3128262 AGCTATTGCCTTTGCAAGCAAAGTCTTTCCAGTTCCTGG 3128300
>seq7
Length=151357931
Score = 91.5 bits (100), Expect = 2e-13
Identities = 216/322 (67%), Gaps = 16/322 (5%)
Strand=Plus/Plus
Query 15936 TTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTGTCA 15993
|| ||||| |||| |||| || || |||| | | | || ||||||||||| ||||
Sbjct 78779690 TTTGTTGCCGCGAGCACAATAACCCCGCTGTTCCCTGAG--AATCCATCCATCTCCGTCA 78779747
Query 15994 AAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCG 16051
| |||||||| ||||| || |||| ||||||||| || | | | | || || | |
Sbjct 78779748 ACAGCTGGTTTATAGTCTGCTCCCTCTCATCATTCCCT--CCTCCAAGCCCCGCCCCTCT 78779805
Query 16052 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGC 16107
||| | || || |||||||||||||| ||||| || || || || || ||||||
Sbjct 78779806 CTGCCTCCCAACTGCATCAATCTCATCGATGAACACAATACAGGGTGCCTTAGATTTCGC 78779865
Query 16108 GAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAA 16167
| || || | ||||| || | ||| |||||||||||||||| || || |
Sbjct 78779866 CTTC----TCGAATAAATCCCTAACCCTAGAGGCTCCCACACCAACAAACAATTCGACGA 78779921
Query 16168 AGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227
| | | || | |||| | ||| || || | || || || | || ||||| |
Sbjct 78779922 ATTCGGATGCTGCACATGAAAAGAACGGCACTCCGGCCTCTCCGGCCACAGCCCGGGCTA 78779981
Query 16228 GAAGAGTCTTACCCGTACCTGG 16249
||| ||||| ||||| || ||
Sbjct 78779982 AAAGGGTCTTCCCCGTCCCAGG 78780003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620650902570240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |