Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6 165 2e-35 seq8 156 9e-33 seq3 138 3e-27 seq9 84.2 5e-11 >seq6 Length=78779235 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| Sbjct 3703974 ACAAGGTGGAGAGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCTCCCATCTTCA 3703915 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| | | || || || || ||||| || || || || || Sbjct 3703914 AGCTGCTTCCCTGCGAAGATCAACCTCTGCTGATCCGGCGGAATCCCCTCCTTATCCTGT 3703855 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || ||||| || || ||||| || | ||| | |||||| Sbjct 3703854 ATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGCTCTCCACCTCCAAGGTGATCGTCTTC 3703795 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 3703794 CCCGTCAAGGTCTTGACAAATATCTGCAT 3703766 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||||||||| || || || ||||||||||| || ||||| | || || ||| Sbjct 3703518 ACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCCAGAGTCCGGCCGTCCTCG 3703459 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || ||||||||||| | ||| ||||| ||||||||||| || |||||||| Sbjct 3703458 AGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 3703399 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||| || || || || || || || || || | || ||| Sbjct 3703398 ATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGACCTCCAGAGTGATGGTTTTT 3703339 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 3703338 CCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || ||||||||||| || || || ||||| || ||||| || || ||||| | ||| | Sbjct 3703299 AGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCCAAAGTACGG 3703240 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || || ||||| | | ||| ||||| ||||||||||| || Sbjct 3703239 CCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCCTCC 3703180 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || |||||| || ||||| || || || || || || || | || Sbjct 3703179 TTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCGACCTCCAACGTT 3703120 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || |||| || || || || | ||||| Sbjct 3703119 ATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082 >seq8 Length=131339754 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || || || |||||||| |||||||| |||||||| ||| Sbjct 3135329 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCTCCCATCCTCG 3135388 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||| ||||| || | || ||||| ||||| || ||||| || || || Sbjct 3135389 AGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGG 3135448 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||| ||||| || ||||| || | || | |||||| Sbjct 3135449 ATCTTGGCCTTCACATTGTCGATGGTATCCGAGCTCTCCACCTCCAAAGTGATCGTCTTC 3135508 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || || || | ||||| Sbjct 3135509 CCTGTAAGGGTCTTCACAAAAATCTGCAT 3135537 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| |||||||| ||||| || ||||| || || ||||| | ||||| ||| Sbjct 3135557 ACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCTAGAGTGCGGCCATCCTCG 3135616 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || | || ||||| || || || ||||| ||||| || Sbjct 3135617 AGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGG 3135676 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || |||||||| ||||| || ||||| ||||| || | ||||| Sbjct 3135677 ATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTCTCCACCTCAAGAGTGATGGTCTTC 3135736 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 3135737 CCCGTAAGAGTCTTCACGAAAATCTGCAT 3135765 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || ||||| ||||| || |||||||| ||||| |||| || || || Sbjct 3135785 ACAAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCTGCAAGGGTTCGGCCGTCCTCA 3135844 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || || || || || ||||| || || || || Sbjct 3135845 AGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGGATGCCCTCCTTATCCTGT 3135904 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || || ||||| || ||||| || | ||||| || ||| Sbjct 3135905 ATCTTGGCCTTGACATTGTCGATTGTATCCGAGCTCTCCACCTCCAAGGTAATGGTTTTT 3135964 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| || || ||||| | |||||| Sbjct 3135965 CCTGTCAGGGTCTTAACGAAAATTTGCAT 3135993 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || ||||| || || ||||| | ||||| ||| Sbjct 3136697 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCATCCTCG 3136756 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| |||||||| || || | || |||||||| || ||||| || ||||| || Sbjct 3136757 AGTTGCTTTCCTGCGAAAATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 3136816 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| || ||||| ||||| || || ||||| |||||||| | |||||| Sbjct 3136817 ATCTTGGCTTTGACATTGTCAATAGTGTCTGAGCTCTCCACCTCAAGGGTGATAGTCTTT 3136876 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || || || | ||||| Sbjct 3136877 CCTGTAAGTGTCTTCACAAAGATCTGCAT 3136905 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || ||||| ||||| || || || || ||||| || | ||||| || Sbjct 3136469 ACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGTCAGCAAGGGTACGGCCATCCTCA 3136528 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || || || | || ||||| || || ||||| || ||||| || Sbjct 3136529 AGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 3136588 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||| || || || ||||| || || || || |||||||| | || ||| Sbjct 3136589 ATTTTGGCCTTGACATTGTCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTTTTT 3136648 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || || || | ||||| Sbjct 3136649 CCTGTCAAGGTCTTGACAAAAATCTGCAT 3136677 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || |||| || || ||| Sbjct 122668977 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCG 122669036 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || || || ||||| || || || || || |||||||| Sbjct 122669037 AGCTGCTTTCCCGCGAAAATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGG 122669096 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || |||||||| || || || ||||| | ||||| Sbjct 122669097 ATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 122669156 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 122669157 CCGGTGAGGGTTTTGACGAAGATCTGCAT 122669185 >seq3 Length=113259003 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| ||||| ||||||||||| || || || | || || || Sbjct 21886192 ACGAGGTGGAGTGTGGACTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCA 21886251 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| |||| ||| ||||| || || || || || ||||| || Sbjct 21886252 AGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGG 21886311 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||| || ||||||||||| ||||| || || || || || | ||||| Sbjct 21886312 ATTTTGGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTG 21886371 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | ||||| Sbjct 21886372 CCTGTGAGGGTTTTCACAAAGATCTGCAT 21886400 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || || || ||||| || ||||| || | ||||| || | |||| Sbjct 21885742 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAACTGC 21885801 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || || | || |||||||| || ||||| || ||||| ||||| || Sbjct 21885802 TTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTG 21885861 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || || |||||||| || || |||||||||||||| | ||||| || || Sbjct 21885862 GCTTTTACATTGTCGATGGTGTCTGAGCTCTCCACTTCAAGGGTGATAGTCTTGCCAGTG 21885921 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 21885922 AGGGTCTTGACAAAAATCTGCAT 21885944 Score = 111 bits (122), Expect = 3e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || || |||| ||||||||||| |||||||| || || || || || || || || || Sbjct 21885496 CTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCGAGGGTG 21885555 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||| || |||||||| || || || || | | || |||||||| || || || Sbjct 21885556 CGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCC 21885615 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || ||||| || || ||| || || || || |||||||| || || |||||||| | Sbjct 21885616 TCCTTGTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAA 21885675 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | || || || || | ||||| Sbjct 21885676 GTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716 >seq9 Length=68543460 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || || |||||||| |||||||| | ||||| ||||||||||| || ||||||| Sbjct 1090499 CTTTCTGGATGTTGTAATCAGCAAGAGTCCGACCATCCTCGAGCTGCTTCCCGGCGAAGA 1090558 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | || || || || || || ||||||||| Sbjct 1090559 TCAGACGCTGCTGATCCGGTGGAATGCCT 1090587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109313973972464