Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 3e-20
seq8 98.7 6e-16
seq6 96.9 2e-15
>seq3
Length=113259003
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| |||| || ||||| ||||| ||||||| ||| | ||| |||| |||
Sbjct 21885052 ACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGTCCATCCTCC 21885111
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || | || ||||| | || | ||||||||||||
Sbjct 21885112 AGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTTGTCCTGG 21885171
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| || || | |||| || | ||| || || | ||| ||||| ||
Sbjct 21885172 ATCTTCGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTCTTG 21885231
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| ||||||||||| |||||||||
Sbjct 21885232 CCGGTGAGGGTCTTCACAAAAATCTGCATA 21885261
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||||| ||| | ||||| || | || || ||||| ||||||||||| |
Sbjct 21885946 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCG 21886005
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| |||| |||| || ||||| ||||| ||||| || || | ||||||||| | ||
Sbjct 21886006 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 21886065
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| ||||| ||| || | || | || | ||||||
Sbjct 21886066 ATTCCCTCCTTGTCCTGGATCTTGGCTTTTACATTGTCAATGGTATCGGAGCTCTCAACC 21886125
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||| || || || || || ||||| ||||| || || ||||||||
Sbjct 21886126 TCGAGAGTAATCGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 21886172
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||||| ||||| || | ||||| ||| || ||||| ||||||||||| |
Sbjct 21885490 CCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCG 21885549
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| || ||||| || |||||||| || | | ||||||||| | ||
Sbjct 21885550 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGG 21885609
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930
| ||||||||||| ||||| ||| || || | ||||| || | |||
Sbjct 21885610 ATTCCCTCCTTGTCCTGGATCTTTGCTTTCAC--AT--TGTCGATGGTGTCGGAGCTCTC 21885665
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || | || ||||| || || || || ||||| ||||| ||||||||
Sbjct 21885666 CACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||||| ||| | ||||| || | || || ||||| ||||| ||||| | |
Sbjct 21885718 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 21885777
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||| ||| || || ||||| || || | ||||||||| | ||
Sbjct 21885778 AGGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGG 21885837
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930
| ||||||||||| |||||| ||| || || | ||||| || | |||
Sbjct 21885838 ATGCCCTCCTTGTCCTGAATCTTGGCTTTTAC--AT--TGTCGATGGTGTCTGAGCTCTC 21885893
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || | ||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 21885894 CACTTCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 21885944
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/218 (70%), Gaps = 10/218 (5%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||| | |||| || || || || || || || | ||| | || | || || |||||
Sbjct 21886197 GTGGAGTGTGGACTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCAAGCTG 21886256
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||| |||||||| || |||| ||||||||| | || | |||||||||||| || ||
Sbjct 21886257 TTTGCCGGCAAAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGGATTTT 21886316
Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
|||||| || |||| || ||| ||| || |||| || ||||| || |
Sbjct 21886317 GGCTTTGAC--AT--TATCAATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTGC 21886372
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAGAC 34991
| ||||| || ||||||||||||||||| | ||||||
Sbjct 21886373 CTGTGAGGGTTTTCACAAAGATCTGCATCT--GTAGAC 21886408
>seq8
Length=131339754
Score = 98.7 bits (108), Expect = 6e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| |||| | || || ||||| ||||| || ||
Sbjct 122668995 TCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAAA 122669054
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | |||||||||||| ||||| |||||
Sbjct 122669055 ATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTG 122669114
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || || ||| || |||| ||| ||||| || || ||||| || || ||
Sbjct 122669115 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACG 122669174
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 122669175 AAGATCTGCATGTT 122669188
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | || | || |||| || || || ||||| || ||
Sbjct 3136715 TCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCATCCTCGAGTTGCTTTCCTGCGAAA 3136774
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | ||||||||| | || | ||||||||||| ||||| ||||||
Sbjct 3136775 ATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTG 3136834
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || || | ||| || || ||||| || || |||||||||
Sbjct 3136835 TCAATAGTGTCTGAGCTCTCCACCTCAAGGGTGATAGTCTTTCCTGTAAGTGTCTTCACA 3136894
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 3136895 AAGATCTGCAT 3136905
>seq6
Length=78779235
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812
||||| | || ||||||||| | || | || || ||||||||||||||||| |
Sbjct 3703308 CCTCCACGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCC 3703249
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || ||||| ||||| ||||| || | | ||||||||| | |
Sbjct 3703248 AAAG--TACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAG 3703191
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | ||||||||||| ||||| ||||| | || | || | ||| |
Sbjct 3703190 GAATGCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCGA 3703131
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||||||||||| || || || ||||| ||||||||||||||
Sbjct 3703130 CCTCCAACGTTATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || || ||||| || |||| |||| | || |||| || |||||||| || || ||
Sbjct 3703044 TCCTTTTGGATGTTGTAATCCGCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAG 3702985
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||||||||| | || | ||| |||||||| ||||| ||| || ||
Sbjct 3702984 ATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTTGCTTTAAC--AT 3702927
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| ||| || ||||| |||| || || || || || || || || ||
Sbjct 3702926 --TGTCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTT 3702869
Query 34967 CACAAAGATCTGCAT 34981
|||||||||||||||
Sbjct 3702868 CACAAAGATCTGCAT 3702854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324586945282176
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