Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq1 435 9e-118 seq2 430 4e-116 >seq1 Length=132393784 Score = 435 bits (482), Expect = 9e-118 Identities = 694/987 (70%), Gaps = 8/987 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || |||||||| || | ||||||||||| || | Sbjct 61130405 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 61130346 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | |||||||| || || || Sbjct 61130345 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTCC 61130287 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || ||| | || |||||||| Sbjct 61130286 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTTTACTTTATGGAAACAA 61130227 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | ||||||||||| || Sbjct 61130226 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 61130167 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 |||||||| | | | || || ||| ||||||| || || || ||| | || ||| | Sbjct 61130166 ATGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAGCTAATTGT 61130107 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | ||||||||| | || ||||| || || | |||||||||| || | | Sbjct 61130106 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 61130047 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 || || ||| | || ||||| |||||||||| |||| || | | || ||| || Sbjct 61130046 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 61129987 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || ||||| | |||||| |||| ||||| ||||| |||||| |||||| | || || Sbjct 61129986 TGTTTTCTTGATCTATCCTATCGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 61129927 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 ||||||||||| ||||| ||| | |||||||| ||||| || || || || ||||| || Sbjct 61129926 ATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 61129867 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 ||| || ||| || || ||||| || ||||| || | || || ||||||||| || Sbjct 61129866 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 61129807 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCA--GAAACGACAGAGGAAGTCTCACAGAATTAT 26458 ||||| || | || ||| | || ||||| || || | | || ||| | Sbjct 61129806 TTCCTTGGTAACCT-CTAGTTTAAT-CAGGGAAACCACTGAAAACGAGTCTGCTAATGAA 61129749 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || | || || ||||| ||||| || |||||||| || ||||| || || || ||| Sbjct 61129748 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 61129689 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || |||| || || || ||||| ||||| || || ||||| | || ||||| | Sbjct 61129688 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACACTTCTTCTTG 61129629 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 ||| ||||||| || || || || ||| | || || | ||||| | || ||||| || Sbjct 61129628 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 61129569 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACC 26697 ||| |||||||||| || || ||||| || ||||| ||| || | | | || || | Sbjct 61129568 AACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAGGGTCGTGTTATTAAC 61129509 Query 26698 TACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAA 26757 || ||||||||| | | ||||| |||||||| || | ||||| ||||| || ||||| Sbjct 61129508 -ACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 61129450 Query 26758 TGCTCATAACTTTCCACTTGACTTAGC 26784 |||||| ||||| || || ||| |||| Sbjct 61129449 TGCTCACAACTTCCCTCTAGACCTAGC 61129423 Score = 138 bits (152), Expect = 3e-28 Identities = 194/270 (72%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 26516 TTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTT 26575 ||||| |||| || || || ||||| ||||| || || ||||| | || ||||| Sbjct 54530804 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACACTTCTTC 54530863 Query 26576 CTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCA 26635 | ||| |||||| | || || || ||| | || || | ||||| | || |||| Sbjct 54530864 TTGGCTGTTTGGCCTATAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTTTGGCT 54530923 Query 26636 TTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAAT 26694 || ||| |||||||||| || || ||||| || ||||| ||| || || | | | || | Sbjct 54530924 TTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCATGTTATT 54530983 Query 26695 ACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCG 26754 | | || ||||||||| | | ||||| |||||||| || | ||||| ||||| || || Sbjct 54530984 AAC-ACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACG 54531042 Query 26755 TAATGCTCATAACTTTCCACTTGACTTAGC 26784 ||||||||| ||||| || || ||| |||| Sbjct 54531043 TAATGCTCACAACTTCCCTCTAGACCTAGC 54531072 >seq2 Length=84732013 Score = 430 bits (476), Expect = 4e-116 Identities = 693/987 (70%), Gaps = 8/987 (1%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || |||||||| || | ||||||||||| || | Sbjct 6464203 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 6464262 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | || ||||| || || || Sbjct 6464263 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCTCC 6464321 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || ||| | || |||||||| Sbjct 6464322 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTTTACTTTATGGAAACAA 6464381 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | ||||||||||| || Sbjct 6464382 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 6464441 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 |||||||| | | | || || ||| ||||||| || || || ||| | || ||| | Sbjct 6464442 ATGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAGCTAATTGT 6464501 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | ||||||||| | || ||||| || || | |||||||||| || | | Sbjct 6464502 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 6464561 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 || || ||| | || ||||| |||||||||| |||| || | | || ||| || Sbjct 6464562 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 6464621 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || ||||| | |||||| |||| ||||| ||||| |||||| |||||| | || || Sbjct 6464622 TGTTTTCTTGATCTATCCTATCGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 6464681 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 ||||||||||| ||||| ||| | |||||||| ||||| || || || || ||||| || Sbjct 6464682 ATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 6464741 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 ||| || ||| || || ||||| || ||||| || | || || ||||||||| || Sbjct 6464742 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 6464801 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCA--GAAACGACAGAGGAAGTCTCACAGAATTAT 26458 ||||| || | || ||| | || ||||| || || | | || ||| | Sbjct 6464802 TTCCTTGGTAACCT-CTAGTTTAAT-CAGGGAAACCACTGAAAACGAGTCTGCTAATGAA 6464859 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || | || || ||||| ||||| || |||||||| || ||||| || || || ||| Sbjct 6464860 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 6464919 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || |||| || || || ||||| ||||| || || ||||| | || ||||| | Sbjct 6464920 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACACTTCTTCTTG 6464979 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 ||| ||||||| || || || || ||| | || || | ||||| | || ||||| || Sbjct 6464980 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 6465039 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACC 26697 ||| |||||||||| || || ||||| || ||||| ||| || | | | || || | Sbjct 6465040 AACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAGGGTCGTGTTATTAAC 6465099 Query 26698 TACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAA 26757 || ||||||||| | | ||||| |||||||| || | ||||| ||||| || ||||| Sbjct 6465100 -ACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 6465158 Query 26758 TGCTCATAACTTTCCACTTGACTTAGC 26784 |||||| ||||| || || ||| |||| Sbjct 6465159 TGCTCACAACTTCCCTCTAGACCTAGC 6465185 Score = 212 bits (234), Expect = 2e-50 Identities = 340/482 (71%), Gaps = 6/482 (1%) Strand=Plus/Minus Query 26306 GTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGG 26365 |||||||| ||||| || || || || ||||| ||||| || ||| || || ||||| Sbjct 76525661 GTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGT 76525602 Query 26366 GTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATT 26425 || ||||| || | || || ||||||||| || ||||| || || | ||| | Sbjct 76525601 GTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTAAT 76525543 Query 26426 GCAG--AAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAG 26483 ||| |||| || || | | || ||| | || || | || || ||||| |||| Sbjct 76525542 -CAGGGAAACCACTGAAAACGAGTCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 76525484 Query 26484 AGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGA 26543 | || |||||||| || ||||| || || || ||||| |||| || || || ||||| | Sbjct 76525483 AAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 76525424 Query 26544 GTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATAT 26603 |||| || || ||||| | || ||||| | ||| ||||||| || || || || | Sbjct 76525423 GTTTCAACAATTCTCGTTCCTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGTATCT 76525364 Query 26604 GGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACC 26663 || | || || | ||||| | || ||||| || ||| |||||||||| || || |||| Sbjct 76525363 GGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACC 76525304 Query 26664 AGTCAGTAGTAGATGTTAATGGAAA-GATAATACCTACATGGGCTGATGTATTAAACCGA 26722 | || ||||| ||| | | || | || || | || ||||||||| | | ||||| Sbjct 76525303 AATCTGTAGTTGATAGTCAGGGTCGTGTTATTAAC-ACTTGGGCTGATATCATCAACCGT 76525245 Query 26723 GCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTA 26782 |||||||| || | ||||| ||||| || ||||||||||| ||||| || || ||| || Sbjct 76525244 GCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTA 76525185 Query 26783 GC 26784 || Sbjct 76525184 GC 76525183 Score = 95.1 bits (104), Expect = 4e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 26252 AGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTC 26311 ||||| |||||| |||||| | || || ||||||||||| ||||| ||| | |||||| Sbjct 6465241 AGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTCATGATTGTATTC 6465300 Query 26312 CAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTC 26371 || ||||| || || || || ||||| ||||| || ||| || || ||||| || ||| Sbjct 6465301 CAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTC 6465360 Query 26372 GGTGG 26376 || || Sbjct 6465361 GGCGG 6465365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146705853902208