Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq2 84.2 3e-11
>seq2
Length=84732013
Score = 84.2 bits (92), Expect = 3e-11
Identities = 104/140 (74%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227
|||| || || || ||||| ||||| | ||||| |||| | ||| | || || ||||
Sbjct 24868682 ACAACAAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAA 24868623
Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CCA 37286
||||||| || ||||| || || | ||||||| ||| || || || |||||| | ||
Sbjct 24868622 AGGTTAACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGC-ACAAAAGCTCCCG 24868564
Query 37287 GAAAAGAAAATACCTTCAAC 37306
|| |||||||| ||||| ||
Sbjct 24868563 GAGAAGAAAATCCCTTCGAC 24868544
Score = 84.2 bits (92), Expect = 3e-11
Identities = 104/140 (74%), Gaps = 2/140 (1%)
Strand=Plus/Plus
Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227
|||| || || || ||||| ||||| | ||||| |||| | ||| | || || ||||
Sbjct 26602944 ACAACAAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAA 26603003
Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CCA 37286
||||||| || ||||| || || | ||||||| ||| || || || |||||| | ||
Sbjct 26603004 AGGTTAACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGC-ACAAAAGCTCCCG 26603062
Query 37287 GAAAAGAAAATACCTTCAAC 37306
|| |||||||| ||||| ||
Sbjct 26603063 GAGAAGAAAATCCCTTCGAC 26603082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592229492503680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |