Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 6e-28
>seq2
Length=84732013
Score = 140 bits (154), Expect = 6e-28
Identities = 380/573 (66%), Gaps = 18/573 (3%)
Strand=Plus/Minus
Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180
||| | || ||| || || || | || | ||||||||| || |||||| |||| ||
Sbjct 24868684 ATACAACAAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGA 24868625
Query 48181 GAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240
||| | || ||||| | || | || ||| ||||||||||| || | |||| ||
Sbjct 24868624 AAAGGTTAACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCC 24868566
Query 48241 AG-AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGT 48299
| ||||||| || || || || || || ||| | | ||||| |||||||
Sbjct 24868565 CGGAGAAGAAAATCCCTTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAAGAC---- 24868510
Query 48300 TCTT-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTC 48358
||| | | |||||| |||||||| || |||||||| || ||| || || |||
Sbjct 24868509 TCTGAGCCATCGATCCACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTC 24868450
Query 48359 TCTATGGCCCGGAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGC 48415
|| ||||| | || || |||| ||| | | |||| | |||| |||
Sbjct 24868449 TCGATGGCGTGAAAAAGGCGGCTCTTT---TCATCGGAGTCCTTGATGTAGGATTCGAGG 24868393
Query 48416 AGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCC 48475
|| | ||||||||| ||||| | ||||| || ||||||||||| ||||||||||||
Sbjct 24868392 AGAAGCGAGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCC 24868333
Query 48476 CTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTAT 48534
|||||||| ||||| || || | ||| | || || || ||||| ||| ||
Sbjct 24868332 CTGGCCTCGGCGACCTGGACCTCCTTCATGAAAC-GGCCGGCGAGGTTCTCCAGGACGAT 24868274
Query 48535 CCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGT 48594
|| || || || || |||||||| ||||| || | | ||| |||||||||| | |||
Sbjct 24868273 GCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGT 24868214
Query 48595 GAGAG---CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAA 48651
|| | | |||| | | |||| || || || || || || | ||||||||
Sbjct 24868213 TAGGGTTTGGTCCCAGTGGCGGATATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAA 24868154
Query 48652 GGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
|| || || || |||||||| |||| ||
Sbjct 24868153 CGAGGCCTCGGCCTTCTTGTACATCTCCCAGAT 24868121
Score = 140 bits (154), Expect = 6e-28
Identities = 380/573 (66%), Gaps = 18/573 (3%)
Strand=Plus/Plus
Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180
||| | || ||| || || || | || | ||||||||| || |||||| |||| ||
Sbjct 26602942 ATACAACAAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGA 26603001
Query 48181 GAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240
||| | || ||||| | || | || ||| ||||||||||| || | |||| ||
Sbjct 26603002 AAAGGTTAACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCC 26603060
Query 48241 AG-AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGT 48299
| ||||||| || || || || || || ||| | | ||||| |||||||
Sbjct 26603061 CGGAGAAGAAAATCCCTTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAAGAC---- 26603116
Query 48300 TCTT-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTC 48358
||| | | |||||| |||||||| || |||||||| || ||| || || |||
Sbjct 26603117 TCTGAGCCATCGATCCACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTC 26603176
Query 48359 TCTATGGCCCGGAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGC 48415
|| ||||| | || || |||| ||| | | |||| | |||| |||
Sbjct 26603177 TCGATGGCGTGAAAAAGGCGGCTCTTT---TCATCGGAGTCCTTGATGTAGGATTCGAGG 26603233
Query 48416 AGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCC 48475
|| | ||||||||| ||||| | ||||| || ||||||||||| ||||||||||||
Sbjct 26603234 AGAAGCGAGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCC 26603293
Query 48476 CTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTAT 48534
|||||||| ||||| || || | ||| | || || || ||||| ||| ||
Sbjct 26603294 CTGGCCTCGGCGACCTGGACCTCCTTCATGAAAC-GGCCGGCGAGGTTCTCCAGGACGAT 26603352
Query 48535 CCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGT 48594
|| || || || || |||||||| ||||| || | | ||| |||||||||| | |||
Sbjct 26603353 GCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGT 26603412
Query 48595 GAGAG---CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAA 48651
|| | | |||| | | |||| || || || || || || | ||||||||
Sbjct 26603413 TAGGGTTTGGTCCCAGTGGCGGATATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAA 26603472
Query 48652 GGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
|| || || || |||||||| |||| ||
Sbjct 26603473 CGAGGCCTCGGCCTTCTTGTACATCTCCCAGAT 26603505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931395492065280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |