Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_020874.1
Length=46198
Score E
Sequences producing significant alignments: (Bits) Value
seq1 435 9e-118
seq2 430 4e-116
>seq1
Length=132393784
Score = 435 bits (482), Expect = 9e-118
Identities = 694/987 (70%), Gaps = 8/987 (1%)
Strand=Plus/Plus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||| ||||||||||| || ||||| ||||| | || ||||||
Sbjct 61129423 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 61129482
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTACTGA 25995
|| ||||| | | ||||||||| || | || || | | | || ||| ||||| ||
Sbjct 61129483 GCACGGTTGATGATATCAGCCCAAGT-GTTAATAACACGACCCTGACTATCAACTACAGA 61129541
Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055
||||| || || |||||||||| ||| || ||||| || | ||||| | || || |
Sbjct 61129542 TTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAA 61129601
Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
||| || || || || ||||||| ||| | ||||| || | ||||| || || ||
Sbjct 61129602 CCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAGGAACGAGAATTGTTGAA 61129661
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175
||| ||||| || || || |||| ||||| || || || ||||| || |||||||| ||
Sbjct 61129662 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGT 61129721
Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTC--T 26233
||||| ||||| || || | || || | ||| || | | || || ||||| |
Sbjct 61129722 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTGGTTTCCCT 61129781
Query 26234 GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAA 26293
| | ||| || | || ||||| || ||||||||| || || | || |||||
Sbjct 61129782 G-ATTAAACTAG-AGGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAAT 61129839
Query 26294 ACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAAT 26353
|| ||||| || || ||| || ||||| ||||| || || || || ||||| ||||||
Sbjct 61129840 ACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAAT 61129899
Query 26354 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCT 26413
|| | ||| ||||| ||||||||||| || || | |||||| |||||| ||||| |||
Sbjct 61129900 ACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 61129959
Query 26414 TGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCA 26473
|| |||| |||||| | ||||| || || ||| || | | || |||| |||||||
Sbjct 61129960 TGACCGATAGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 61130019
Query 26474 ACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT 26533
||| ||||| || | ||| || || | | || |||||||||| | || ||
Sbjct 61130020 ACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAA 61130079
Query 26534 GCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGC 26593
||||| || | ||||||||| | | ||| || | ||| || || || ||||||| |
Sbjct 61130080 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCGTTGTATAAC 61130139
Query 26594 CACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAG 26653
|| || || | | | |||||||| || ||||||||||| | || || || |||
Sbjct 61130140 CATTCATCAACGGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGAA 61130199
Query 26654 GAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGC 26713
| || | | || || || || ||||||||||| || | ||| || || ||||| ||
Sbjct 61130200 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGACCCAGAAACAGGT 61130259
Query 26714 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGT 26772
||||| || ||||| |||||||| || || || || |||||||| | ||||| ||| |
Sbjct 61130260 TCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACA-GA 61130318
Query 26773 AGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTT 26832
||| || | | |||| || ||||| | || ||||||||||| | || ||||||||
Sbjct 61130319 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAGACGGTT 61130378
Query 26833 CTCAGTACTTGTAACCCACTCACAAAA 26859
|| || || || | ||| | ||| ||
Sbjct 61130379 TTCGGTGCTGGTTATCCAGTTACAGAA 61130405
Score = 138 bits (152), Expect = 3e-28
Identities = 194/270 (72%), Gaps = 2/270 (1%)
Strand=Plus/Minus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||| ||||||||||| || ||||| ||||| | || ||||||
Sbjct 54531072 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 54531013
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTACTGA 25995
|| ||||| | | ||||||||| || | || || | | | || || ||| ||||| ||
Sbjct 54531012 GCACGGTTAATGATATCAGCCCAAGT-GTTAATAACATGACCTTGACTATCAACTACAGA 54530954
Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055
||||| || || |||||||||| ||| || |||| || | ||||| | || || |
Sbjct 54530953 TTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCAAAGTACTAATACCTAAAGCAGTGAA 54530894
Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
||| || || || | |||||| ||| | ||||| || | ||||| || || ||
Sbjct 54530893 CCAGATACCTACTATAGGCCAAACAGCCAAGAAGAAGTGTAAGGAACGAGAATTGTTGAA 54530834
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAA 26145
||| ||||| || || || |||| |||||
Sbjct 54530833 ACTAGCATATTGGAAGATCAATCGGCCAAA 54530804
>seq2
Length=84732013
Score = 430 bits (476), Expect = 4e-116
Identities = 693/987 (70%), Gaps = 8/987 (1%)
Strand=Plus/Minus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||| ||||||||||| || ||||| ||||| | || ||||||
Sbjct 6465185 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 6465126
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTACTGA 25995
|| ||||| | | ||||||||| || | || || | | | || ||| ||||| ||
Sbjct 6465125 GCACGGTTGATGATATCAGCCCAAGT-GTTAATAACACGACCCTGACTATCAACTACAGA 6465067
Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055
||||| || || |||||||||| ||| || ||||| || | ||||| | || || |
Sbjct 6465066 TTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAA 6465007
Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
||| || || || || ||||||| ||| | ||||| || | ||||| || || ||
Sbjct 6465006 CCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAGGAACGAGAATTGTTGAA 6464947
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175
||| ||||| || || || |||| ||||| || || || ||||| || |||||||| ||
Sbjct 6464946 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGT 6464887
Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTC--T 26233
||||| ||||| || || | || || | ||| || | | || || ||||| |
Sbjct 6464886 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTGGTTTCCCT 6464827
Query 26234 GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAA 26293
| | ||| || | || ||||| || ||||||||| || || | || |||||
Sbjct 6464826 G-ATTAAACTAG-AGGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAAT 6464769
Query 26294 ACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAAT 26353
|| ||||| || || ||| || ||||| ||||| || || || || ||||| ||||||
Sbjct 6464768 ACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAAT 6464709
Query 26354 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCT 26413
|| | ||| ||||| ||||||||||| || || | |||||| |||||| ||||| |||
Sbjct 6464708 ACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 6464649
Query 26414 TGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCA 26473
|| |||| |||||| | ||||| || || ||| || | | || |||| |||||||
Sbjct 6464648 TGACCGATAGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 6464589
Query 26474 ACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT 26533
||| ||||| || | ||| || || | | || |||||||||| | || ||
Sbjct 6464588 ACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAA 6464529
Query 26534 GCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGC 26593
||||| || | ||||||||| | | ||| || | ||| || || || ||||||| |
Sbjct 6464528 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCGTTGTATAAC 6464469
Query 26594 CACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAG 26653
|| || || | | | |||||||| || ||||||||||| | || || || |||
Sbjct 6464468 CATTCATCAACGGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGAA 6464409
Query 26654 GAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGC 26713
| || | | || || || || ||||||||||| || | ||| || || ||||| ||
Sbjct 6464408 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGACCCAGAAACAGGT 6464349
Query 26714 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGT 26772
||||| || ||||| |||||||| || || || || ||||| || | ||||| ||| |
Sbjct 6464348 TCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCGATAATAAATACA-GA 6464290
Query 26773 AGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTT 26832
||| || | | |||| || ||||| | || ||||||||||| | || ||||||||
Sbjct 6464289 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAGACGGTT 6464230
Query 26833 CTCAGTACTTGTAACCCACTCACAAAA 26859
|| || || || | ||| | ||| ||
Sbjct 6464229 TTCGGTGCTGGTTATCCAGTTACAGAA 6464203
Score = 212 bits (234), Expect = 2e-50
Identities = 340/482 (71%), Gaps = 6/482 (1%)
Strand=Plus/Plus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||| ||||||||||| || ||||| ||||| | || ||||||
Sbjct 76525183 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 76525242
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATC-TTTCCATTAACATCTACTACTGA 25995
|| ||||| | | ||||||||| || | || || | || | | ||| ||||| ||
Sbjct 76525243 GCACGGTTGATGATATCAGCCCAAGT-GTTAATAACACGACCCTGACTATCAACTACAGA 76525301
Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055
||||| || || |||||||||| ||| || ||||| || | ||||| | || || |
Sbjct 76525302 TTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAA 76525361
Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
||| || || || || ||||||| ||| | ||||| || | ||||| || || ||
Sbjct 76525362 CCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAGGAACGAGAATTGTTGAA 76525421
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175
||| ||||| || || || |||| ||||| || || || ||||| || |||||||| ||
Sbjct 76525422 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGT 76525481
Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTT--CT 26233
||||| ||||| || || | || || | ||| || | | || || |||| ||
Sbjct 76525482 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTGGTTTCCCT 76525541
Query 26234 GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAA 26293
| | ||| | || || ||||| || ||||||||| || || | || |||||
Sbjct 76525542 G-ATTAAACTA-GAGGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAAT 76525599
Query 26294 ACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAAT 26353
|| ||||| || || ||| || ||||| ||||| || || || || ||||| ||||||
Sbjct 76525600 ACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAAT 76525659
Query 26354 AC 26355
||
Sbjct 76525660 AC 76525661
Score = 95.1 bits (104), Expect = 4e-15
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 26285 CCACCGAAAACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCT 26344
|| ||||| || ||||| || || ||| || ||||| ||||| || || || || |||
Sbjct 6465365 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCT 6465306
Query 26345 GCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTA 26404
|| |||||||| | ||| ||||| ||||||||||| || || | |||||| ||||||
Sbjct 6465305 GCCTGGAATACAATCATGAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAG 6465246
Query 26405 AAACT 26409
|||||
Sbjct 6465245 AAACT 6465241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147691315888640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |