Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 2e-14 >seq6 Length=78779235 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||||||| || || || | || || || || ||||| || || || || Sbjct 3703464 TCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTG 3703405 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| || | ||| |||||||||||| ||| || || ||||| || Sbjct 3703404 TCTTGGATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGACCTCCAGAGTGATG 3703345 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| || || ||||| |||||||| Sbjct 3703344 GTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310 Score = 93.3 bits (102), Expect = 8e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||||| || | ||| || ||| |||||||||| || || | ||| || Sbjct 3703290 ACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCCAAAGTACGGCCATCCTCA 3703231 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | || ||||| ||||| || || || || || || ||||| || || || || ||||| Sbjct 3703230 AGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 3703171 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || || | || | ||| |||||||||||| ||| || || | ||||| ||||| Sbjct 3703170 ATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCGACCTCCAACGTTATGGTTTTC 3703111 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || ||||| Sbjct 3703110 CCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899521790941440