Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq6 95.1 2e-14
>seq6
Length=78779235
Score = 95.1 bits (104), Expect = 2e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||||||||| || || || | || || || || ||||| || || || ||
Sbjct 3703464 TCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTG 3703405
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || |||| || | ||| |||||||||||| ||| || || ||||| ||
Sbjct 3703404 TCTTGGATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGACCTCCAGAGTGATG 3703345
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || ||||| || || ||||| ||||||||
Sbjct 3703344 GTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310
Score = 93.3 bits (102), Expect = 8e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||||| || | ||| || ||| |||||||||| || || | ||| ||
Sbjct 3703290 ACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCCAAAGTACGGCCATCCTCA 3703231
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| || ||||| ||||| || || || || || || ||||| || || || || |||||
Sbjct 3703230 AGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 3703171
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| || | || | ||| |||||||||||| ||| || || | ||||| |||||
Sbjct 3703170 ATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCGACCTCCAACGTTATGGTTTTC 3703111
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || ||||| || |||||
Sbjct 3703110 CCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899521790941440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |