Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 4e-11 >seq3 Length=113259003 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || ||||| | |||| ||| || ||| ||||| |||| | ||||| |||| || Sbjct 21885964 ACCAAATGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCGAGGGTTCGGCCATCCTCA 21886023 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | || || ||||||||||| | ||||| || || || || ||||| || || || || Sbjct 21886024 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 21886083 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || ||||||||| || | ||| || || || || |||||||| || || Sbjct 21886084 ATCTTGGCTTTTACATTGTCAATGGTATCGGAGCTCTCAACCTCGAGAGTAATCGTCTTC 21886143 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || | || |||||||| Sbjct 21886144 CCAGTGAGGGTCTTGACGAAAATCTGCAT 21886172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984331259839200