Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 4e-11
>seq3
Length=113259003
Score = 84.2 bits (92), Expect = 4e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387
|| ||||| | |||| ||| || ||| ||||| |||| | ||||| |||| ||
Sbjct 21885964 ACCAAATGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCGAGGGTTCGGCCATCCTCA 21886023
Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447
| || || ||||||||||| | ||||| || || || || ||||| || || || ||
Sbjct 21886024 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 21886083
Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507
|| || ||||||||| || | ||| || || || || |||||||| || ||
Sbjct 21886084 ATCTTGGCTTTTACATTGTCAATGGTATCGGAGCTCTCAACCTCGAGAGTAATCGTCTTC 21886143
Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || || | || ||||||||
Sbjct 21886144 CCAGTGAGGGTCTTGACGAAAATCTGCAT 21886172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984331259839200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |