Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 4e-13
>seq6
Length=78779235
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CG-GAGC-C 110328
|||||| || || |||||||| | |||||||| ||||| || | || || |||| |
Sbjct 3703537 AATGCAGATTTTCGTCAAAACCCTGACCGGCAAGACCATCACGTTGGAGGTCGAGAGCTC 3703596
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || ||| | | || || |||||| ||||| || ||| | ||| ||
Sbjct 3703597 TGAC---ACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCTGA 3703653
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
|| || || || || | ||| |||||||| || ||||||| | | || | || |||||
Sbjct 3703654 CCAGCAGAGGCTCATCTTTGCCGGTAAACAACTCGAGGATGGCCGGACTCTCGCTGATTA 3703713
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||||||| || || || || | ||| ||||| | || || || || ||
Sbjct 3703714 CAACATTCAGAAGGAGTCGACCCTCCACTTGGTGCTGAGGCTTCGTGGAGG 3703764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412782268469456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |