Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 1e-26
seq6 125 6e-24
seq8 122 7e-23
>seq3
Length=113259003
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| | ||||||||||| || || || || || || ||||| || || |||
Sbjct 21885718 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 21885777
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || | || ||||||||| | |||| || ||||| || || ||
Sbjct 21885778 AGGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGG 21885837
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| ||||| || ||| || | ||| ||| | || | ||||| || || ||
Sbjct 21885838 ATGCCCTCCTTGTCCTG-AATCTTGGCTTTTACATTGTCGATGGTGTCTGAGCTCTCCAC 21885896
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||| || ||||| |||||||| | ||| || ||||| ||||||||
Sbjct 21885897 TTCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 21885944
Score = 120 bits (132), Expect = 2e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| || || ||||||||||||||||| | || ||
Sbjct 21885273 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAATCCGCCAACGTTCGCCC 21885332
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || ||||||||| | || | || ||||| || || || || ||||| ||
Sbjct 21885333 ATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTT 21885392
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| ||| ||| | || | ||||| || || ||||| | ||| ||
Sbjct 21885393 GTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTGAT 21885452
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| |||| ||| |||||||| ||||||||
Sbjct 21885453 GGTCTTGCCGGTTAGGGTCTTAACAAAAATCTGCAT 21885488
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| | ||||||||||| || || || || || || |||||||| || ||
Sbjct 21885946 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCG 21886005
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || || || |||||| | |||| || ||||| || || ||
Sbjct 21886006 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 21886065
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | || ||| ||| | || | || || || || ||
Sbjct 21886066 ATTCCCTCCTTGTCCTGGATCTTGGCTTTTACATTGTCAATGGTATCGGAGCTCTCAACC 21886125
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || ||||| | ||| || || || ||||||||
Sbjct 21886126 TCGAGAGTAATCGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 21886172
>seq6
Length=78779235
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | ||| || || || || ||||| ||||| |||||||||
Sbjct 3703080 CCACCCCTGAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCCGCA 3703021
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || ||||||||||| | || | | |||||| || || ||
Sbjct 3703020 AGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGG 3702961
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | ||| ||| ||| | || | |||||||| ||| ||
Sbjct 3702960 ATCCCTTCCTTGTCCTGGATCTTTGCTTTAACATTGTCGATGGTGTCAGAGGATTCAACC 3702901
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| |||| ||||| ||||| ||||||||
Sbjct 3702900 TCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCACAAAGATCTGCAT 3702854
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||| | || | || || | |||||| |||||||| || || || || ||||| ||
Sbjct 3703537 TCCTCCACGCAGCCTGAGGACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGC 3703478
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || || || ||||||||||| ||||| | || | |||||||| ||||| ||
Sbjct 3703477 CAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGG 3703418
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| ||||| |||||||| | || |||||| | || | ||| || || || ||
Sbjct 3703417 AATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGAC 3703358
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || ||||| || |||| ||| || ||||| || |||||
Sbjct 3703357 CTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | || | || || | ||| || || || || || ||||||||||| || ||
Sbjct 3703308 CCTCCACGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCC 3703249
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || || || || |||||| | ||||| |||||||| ||||| |||
Sbjct 3703248 AAAGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGA 3703189
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| |||||||| | || |||||| | || | ||| || || || ||
Sbjct 3703188 ATGCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCGACC 3703129
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||||| ||||| ||||| | ||| || ||||| ||||||||
Sbjct 3703128 TCCAACGTTATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082
Score = 107 bits (118), Expect = 1e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||||||||| || || || || || || |||||||| ||||| || | || || |||
Sbjct 3703750 CAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCGGCCATC 3703691
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
||||||||||| || ||| | || | || ||||| || || || || ||||| |||||
Sbjct 3703690 CTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 3703631
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
||| | || ||||| | || | |||||||| || || || | || || ||
Sbjct 3703630 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAACGTGATGGT 3703571
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| || | |||||| || || |||||||||
Sbjct 3703570 CTTGCCGGTCAGGGTTTTGACGAAAATCTGCATT 3703537
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | || || || || || || ||||| || ||||| |||| || |
Sbjct 3703981 ACGAAGCACAAGGTGGAGAGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCTCCC 3703922
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || || | ||||| || ||||||||||||||||| ||||| ||
Sbjct 3703921 ATCTTCAAGCTGCTTCCCTGCGAAGATCAACCTCTGCTGATCCGGCGGAATCCCCTCCTT 3703862
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| |||| || ||||| | || | |||||||| || || || | || ||
Sbjct 3703861 ATCCTGTATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGCTCTCCACCTCCAAGGTGAT 3703802
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || ||||| || ||||||||||||||
Sbjct 3703801 CGTCTTCCCCGTCAAGGTCTTGACAAATATCTGCAT 3703766
>seq8
Length=131339754
Score = 122 bits (134), Expect = 7e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || ||||| || ||||| ||||| ||||| || | |||||| || || || ||
Sbjct 3136019 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCTGCTAGGGTGCGGCCGTCCTCAAGCTGC 3136078
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || ||| | || | || ||||| || || || |||||||||||||| || ||||||
Sbjct 3136079 TTCCCCGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCTTTGTCCTG-AATTTT 3136137
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| ||||||| | || | |||||||| || || ||||| || || |||||||||||
Sbjct 3136138 GGCTTTGACATTGTCGATTGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTTTTGCCAGT 3136197
Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || ||||||||
Sbjct 3136198 CAGTGTCTTAACGAAGATCTGCAT 3136221
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||||| || || || ||||| ||||| ||||| |||| ||| || ||
Sbjct 3135782 AGCACAAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCTGCAAGGGTTCGGCCGTCC 3135841
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || ||||| | || | || ||||||||||| || || ||||| || ||
Sbjct 3135842 TCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGGATGCCCTCCTTATCC 3135901
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|||| || |||||| | || | || || || || || || | || || |||
Sbjct 3135902 TGTATCTTGGCCTTGACATTGTCGATTGTATCCGAGCTCTCCACCTCCAAGGTAATGGTT 3135961
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || | ||| ||||| || || |||||
Sbjct 3135962 TTTCCTGTCAGGGTCTTAACGAAAATTTGCAT 3135993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385163838222672
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