Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 2e-14 seq3 84.2 8e-12 >seq9 Length=68543460 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 68075987 GTTGCGGAGATAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 68075928 Query 50170 CTGCTCTACTCCGC 50183 |||||||||||||| Sbjct 68075927 CTGCTCTACTCCGC 68075914 >seq3 Length=113259003 Score = 84.2 bits (92), Expect = 8e-12 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 50115 GGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTGCT 50174 |||| | ||||||||||||| | | || ||| ||||||||| |||||||||| ||||||| Sbjct 99527081 GGAGACAGGATTTGAACCCGTGACATCAAGGTTATGAGCCTTGCGAGCTACCAAACTGCT 99527022 Query 50175 CTACTCCGC 50183 ||||||||| Sbjct 99527021 CTACTCCGC 99527013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181577770103904