Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 8e-12 >seq4 Length=146560859 Score = 86.0 bits (94), Expect = 8e-12 Identities = 116/159 (73%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGA---ATGGCCCAAAAAGGAACTTGT 193496 || || ||| |||| || ||||||||| | ||| | |||||| | || |||||| | Sbjct 138995168 CGGATTCCTCAAATTGGAGATAAATTTAG--CAGTAGACATGGCC-AGAAGGGAACTGTT 138995112 Query 193497 GGTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATT 193556 || |||| ||| | ||||| |||||||| | || | ||| || ||| |||||| Sbjct 138995111 GGCATGACTTACACCCAAGAGGATATGCCGTGGACTGTGGAAGGCATCACACCTGATATT 138995052 Query 193557 ATTATTAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 ||| |||||||| || |||||| || ||||||||||| Sbjct 138995051 ATTGTTAATCCACATGCTATTCCTTCTCGAATGACCATT 138995013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635083974821760