Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq5 86.0 6e-12 >seq6 Length=78779235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| || ||||| ||||||||||| | || | || || || ||||| ||| Sbjct 3703050 GTAGACTCCTTTTGGATGTTGTAATCCGCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCA 3702991 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| ||||||||||| |||||||| || ||||| ||||| || ||| ||| Sbjct 3702990 GCGAAGATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTTGCTTTA 3702931 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | || ||| || || | || | ||||||||||| | |||| Sbjct 3702930 ACATTGTCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTT 3702871 Query 137395 TTTACGAATATTTGCAT 137411 || || || || ||||| Sbjct 3702870 TTCACAAAGATCTGCAT 3702854 >seq5 Length=131469567 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 137180 CATGG--CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTA 137237 ||||| ||||||| | | |||||||| ||||| || || ||||| ||||||||||| Sbjct 77212201 CATGGTTCCTCCTCTAAGCCTCAAAACTAGATGAAGAGTTGACTCTTTCTGTATGTTGTA 77212142 Query 137238 ATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATC 137297 ||| || || || ||||| | ||| || |||||| | || || | |||||||| Sbjct 77212141 ATCAGCCAGGGTCCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTCTGCTGATC 77212082 Query 137298 GGGAGGTATGCCTTCTTTGTC 137318 |||||||| || ||||| || Sbjct 77212081 AGGAGGTATACCCTCTTTATC 77212061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488471988614400