Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 3e-14
seq8 87.8 1e-12
seq3 82.4 5e-11
>seq6
Length=78779235
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | ||| | || | ||| || || ||| ||||| ||||||||||| |
Sbjct 3703080 CCACCCCTGAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCCGCA 3703021
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || || | ||||| || || || || | ||| ||||| || | ||
Sbjct 3703020 AGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGG 3702961
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || || || ||||| ||| | |||||| ||||| ||
Sbjct 3702960 ATCCCTTCCTTGTCCTGGATCTT-TGCTTTAACATTGTCGATGGTGTCAGAGGATTCAAC 3702902
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || |||| ||||| ||||||||||||||
Sbjct 3702901 CTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCACAAAGATCTGCAT 3702854
>seq8
Length=131339754
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| || ||| ||| ||||| ||||||||||| | || ||||| |||| || | ||
Sbjct 3136019 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCTGCTAGGGTGCGGCCGTCCTCAAGCTGC 3136078
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || |||||||| | | |||||| ||| | || | ||| |||||||| ||||||
Sbjct 3136079 TTCCCCGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCTTTGTCCTGAATTTT- 3136137
Query 33667 TGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722
| || |||| ||| | ||||| ||| || || |||| ||||| ||||| ||
Sbjct 3136138 GGCTTTGACATTGTCGATTGTGTCAGAGCT---CTCGACCTCAAGGGTGATGGTTTTGCC 3136194
Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || || |||||||||||
Sbjct 3136195 AGTCAGTGTCTTAACGAAGATCTGCAT 3136221
Score = 84.2 bits (92), Expect = 1e-11
Identities = 151/217 (70%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596
|| ||| | ||| || ||| ||| ||||| |||||||| |||| ||| || || | ||
Sbjct 3136237 TAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGACCATC 3136296
Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656
|| | || || ||||||||||| | | |||||| ||| | || | || || |||||
Sbjct 3136297 CTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 3136356
Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGA 33712
||||| | | |||| ||| | ||||| ||| || || |||| |||||
Sbjct 3136357 CTGGATTTT-GGCCTTGACATTGTCGATTGTGTCAGAGCT---CTCAACCTCAAGCGTGA 3136412
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| ||||| || || || || || ||||| ||||||||
Sbjct 3136413 TGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
>seq3
Length=113259003
Score = 82.4 bits (90), Expect = 5e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| || ||| ||| || || ||||| || || | ||| ||||| | || || | ||
Sbjct 21885514 TGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCGAGGGTGCGGCCATCCTCAAGCTGC 21885573
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| |||||||||||||| | |||||| ||| | || | || || ||||| || ||
Sbjct 21885574 TTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTT- 21885632
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| || |||| ||| | ||||||| ||||| || | ||||| || || || ||
Sbjct 21885633 TGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTGCCGGT 21885692
Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749
|| || || ||||| ||||||||
Sbjct 21885693 TAGGGTCTTGACAAAAATCTGCAT 21885716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328656760304640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |