Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq6 138 3e-27
seq8 132 1e-25
seq3 118 3e-21
seq5 107 5e-18
>seq6
Length=78779235
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| ||| || | || || || |||||||| ||||| ||||| || ||||||
Sbjct 3703769 CAGATATTTGTCAAGACCTTGACGGGGAAGACGATCACCTTGGAGGTGGAGAGCTCTGAC 3703828
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || ||| |||||| ||
Sbjct 3703829 ACGATCGACAACGTCAAGGCGAAGATACAGGATAAGGAGGGGATTCCGCCGGATCAGCAG 3703888
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | |||||||| || |||||| | |||||||| |||||| | || |||||||| |
Sbjct 3703889 AGGTTGATCTTCGCAGGGAAGCAGCTTGAAGATGGGAGGACTCTTGCTGATTACAATATT 3703948
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||||||||| ||||||||
Sbjct 3703949 CAGAAGGAGTCTACTCTCCACCTTGT 3703974
Score = 120 bits (132), Expect = 7e-22
Identities = 148/201 (74%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || || |||||||| |||||| |||| || || || || || || |
Sbjct 3703318 TTTTGTCAAGACCCTAACCGGAAAAACCATCACTCTGGAGGTCGAGAGCTCCGATACTAT 3703377
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| ||||| ||||| || || || ||| |||||| ||||| ||
Sbjct 3703378 TGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAAAGGCT 3703437
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||||||| ||||| || | || || || ||||| |||| |||||||| |||||||
Sbjct 3703438 TATCTTCGCTGGAAAACAACTCGAGGACGGCCGGACTCTGGCTGATTACAATATCCAGAA 3703497
Query 206358 AGAGTCTACTCTTCACCTTGT 206378
|| || |||||||| |||||
Sbjct 3703498 GGAATCCACTCTTCATCTTGT 3703518
Score = 118 bits (130), Expect = 3e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || ||||| || || ||||| || || || || ||
Sbjct 3703085 CAGATCTTTGTCAAGACCCTGACTGGGAAAACCATAACGTTGGAGGTCGAGAGCTCCGAT 3703144
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| || || || ||| |||||| |||
Sbjct 3703145 ACTATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAA 3703204
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| || ||||||||| | || ||||| | ||||||||||| || ||| |
Sbjct 3703205 AGGTTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACTTTGGCCGACTATAACATT 3703264
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| || || || ||||||||||| || ||
Sbjct 3703265 CAGAAGGAGTCAACCCTGCATCTTGTTTTGAGGCTGCG 3703302
Score = 91.5 bits (100), Expect = 3e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|||||||| ||||||||||| ||||| | ||| || ||||| | |||||| ||||||||
Sbjct 3703974 ACAAGGTGGAGAGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCTCCCATCTTCA 3703915
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||| || |||||||| | || || |||
Sbjct 3703914 AGCTGCTTCCCTGCGAAGATCAACCTCTGCTGA 3703882
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || ||||||||||| || || || ||||| ||||| | |||||||| ||||||||
Sbjct 3703302 CGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCCAAAGTA 3703243
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||||| || ||||||||||| || ||||| | || ||| ||
Sbjct 3703242 CGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTG 3703199
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
||||| |||||||| || || ||||||| ||| || ||||||| ||||| || || ||
Sbjct 3703518 ACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCCAGAGTCCGGCCGTCCTCG 3703459
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|| || ||||| ||||||||||||| ||| ||
Sbjct 3703458 AGTTGTTTTCCAGCGAAGATAAGCCTTTGCTG 3703427
>seq8
Length=131339754
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || ||||| || |||||||||||||| ||||| || || ||
Sbjct 3135534 CAGATTTTTGTGAAGACCCTTACAGGGAAGACGATCACTTTGGAGGTGGAGAGCTCGGAT 3135475
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||| || |||||| ||
Sbjct 3135474 ACCATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCGGACCAGCAG 3135415
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| || || |||||| | || ||||| |||||| | || ||||||||| ||
Sbjct 3135414 AGGCTCATCTTTGCAGGGAAGCAGCTCGAGGATGGGAGGACTCTTGCAGATTACAACATC 3135355
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||||||
Sbjct 3135354 CAGAAGGAGTCCACCCTTCACCTTGT 3135329
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || ||||||||||| || || ||||| ||||| || || || ||| ||||
Sbjct 3135978 AAGACCCTGACAGGAAAAACCATTACCTTGGAGGTGGAGAGCTCGGATACAATCGACAAT 3135919
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || ||||| || || || ||||||
Sbjct 3135918 GTCAAGGCCAAGATACAGGATAAGGAGGGCATCCCCCCGGATCAGCAGAGGCTCATCTTC 3135859
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || || || | || | || ||||||||| |||| || |||||
Sbjct 3135858 GCTGGGAAGCAGCTTGAGGACGGCCGAACCCTTGCAGATTACAACATCCAAAAGGAGTCG 3135799
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| ||||||||||| | || |||||
Sbjct 3135798 ACCCTTCACCTTGTGCTCAGGCTTCG 3135773
>seq3
Length=113259003
Score = 118 bits (130), Expect = 3e-21
Identities = 152/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||||||||||||||| || || |||
Sbjct 21885485 CAGATTTTTGTTAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTCCGAC 21885426
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||||| |||||| || || || || ||||| || ||| ||
Sbjct 21885425 ACCATCGACAATGTGAAAGC-AAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCA 21885367
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| |||||||| || || |||||| | || ||||| | || ||||| ||||| ||| |
Sbjct 21885366 GAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGAACGTTGGCGGATTATAACAT 21885307
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||||||
Sbjct 21885306 TCAGAAGGAGTCCACCCTCCACCTTGT 21885280
Score = 113 bits (124), Expect = 1e-19
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || || ||||||||||||||||| || || |||
Sbjct 21885713 CAGATTTTTGTCAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTCCGAC 21885654
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || |||||||| ||| || || || || ||||| || ||| ||
Sbjct 21885653 ACCATCGACAATGTGAAAGCAAA-GATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCA 21885595
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| | || || ||||| |||||| | || ||||| | || | || || || ||| |
Sbjct 21885594 GAGGTTGATTTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTATAACAT 21885535
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|||||| ||||| || ||||||||||| |||| ||
Sbjct 21885534 CCAGAAGGAGTCCACCCTTCACCTTGTGCTGAGGCT 21885499
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| |||||||| || || |||||| | || || || |||||||||
Sbjct 21886397 CAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACTCTCGAGGTCGAGAGTTCTGAC 21886338
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || ||||| ||| || || || || || || || || ||| ||
Sbjct 21886337 ACCATTGATAATGTCAAAGCCAAA-ATCCAGGACAAGGAGGGGATCCCCCCTGACCAGCA 21886279
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||||| ||||| ||||| || ||| | || || || | || | || |||||||| |
Sbjct 21886278 AAGACTGATCTTTGCCGGCAAACAGCTTGAGGACGGCCGTACCCTCGCTGATTACAATAT 21886219
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||| || ||||| || || ||||| ||
Sbjct 21886218 CCAAAAGGAGTCCACACTCCACCTCGT 21886192
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || || || ||||| | |||||||| || || |||
Sbjct 21885941 CAGATTTTTGTCAAGACCCTCACTGGCAAGACTATCACCCTTGAAGTGGAGAGCTCAGAC 21885882
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| ||||| |||||||| || || || || || || ||| ||
Sbjct 21885881 ACCATCGACAATGTAAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 21885822
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || || || || || ||||||||||| ||||| | || | || || |||||| ||
Sbjct 21885821 AGGCTGATTTTTGCTGGCAAGCAGTTGGAGGATGGCCGTACCCTTGCTGACTACAACATC 21885762
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| ||||| || || ||
Sbjct 21885761 CAGAAGGAGTCGACCCTCCA 21885742
>seq5
Length=131469567
Score = 107 bits (118), Expect = 5e-18
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| || || || || || |||||||| ||||||||||||||||| |||| |||||||||
Sbjct 77212088 CAGAGGCTAATTTTTGCTGGAAAGCAATTGGAAGATGGAAGGACCCTGGCTGATTACAAC 77212147
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
| ||||||||||| |||||||| || |||||||| ||| ||
Sbjct 77212148 ATACAGAAAGAGTCAACTCTTCATCTAGTTTTGAGGCTTAGA 77212189
Score = 96.9 bits (106), Expect = 8e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|| ||| |||||||| || |||||||| ||||||||||| | || || ||||||| ||
Sbjct 77212189 TCTAAGCCTCAAAACTAGATGAAGAGTTGACTCTTTCTGTATGTTGTAATCAGCCAGGGT 77212130
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||||| |||||||| || || || |||| || |||
Sbjct 77212129 CCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTCTGCTGA 77212084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181642244604432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |