Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq5 87.8 2e-12 >seq6 Length=78779235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || ||||||||||| | ||||| | || ||||| | Sbjct 3703309 CATGCAAATTTTTGTCAAGACCCTAACCGGAAAAACCATCACTCTGGAGGTCGAGAGCTC 3703368 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||||||| || | || || || || || || ||||| || || || || || Sbjct 3703369 CGATACTATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 3703428 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||||| || || | || || ||||||||||| || | | | | | |||||||| Sbjct 3703429 GCAAAGGCTTATCTTCGCTGGAAAACAACTCGAGGACGGCCGGACTCTGGCTGATTACAA 3703488 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||| || || |||||||| ||||| | || | || || | ||||||| Sbjct 3703489 TATCCAGAAGGAATCCACTCTTCATCTTGTCCTCAGGCTGCGTGGAGGAA 3703538 >seq5 Length=131469567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||||||||||||||| || |||||||| || || |||| | || || ||| | ||| Sbjct 77212061 GATAAAGAGGGTATACCTCCTGATCAGCAGAGGCTAATTTTTGCTGGAAAGCAATTGGAA 77212120 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 |||| || | | |||||||| || || ||||| || || ||||| |||| || Sbjct 77212121 GATGGAAGGACCCTGGCTGATTACAACATACAGAAAGAGTCAACTCTTCATCTAGTTTTG 77212180 Query 25388 AGATTGAGAGGAGGAA-AATGATCA 25411 || | |||||||||| ||||||| Sbjct 77212181 AGGCTTAGAGGAGGAACCATGATCA 77212205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445028793085440