Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq6 122 8e-23 seq8 107 2e-18 seq7 87.8 2e-12 >seq3 Length=113259003 Score = 123 bits (136), Expect = 2e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| || | || ||||||||||| || ||||| Sbjct 21885069 CTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGTCCATCCTCCAGCTGCTTGCCTGCAAA 21885128 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||| ||||||| ||| | | |||||||||| |||||| ||||| | | Sbjct 21885129 GATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 21885188 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| |||| |||||||||| ||||| || || || || | || || Sbjct 21885189 GTCAATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTT 21885245 Query 35722 CACAAATATCTGCAT 35736 |||||| |||||||| Sbjct 21885246 CACAAAAATCTGCAT 21885260 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/201 (71%), Gaps = 9/201 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| || |||||||| || | ||| || |||| || ||||| || || ||||| Sbjct 21886209 CTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCAAA 21886268 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAG 35663 |||| | |||||||| | || | | |||||||||| ||| ||| |||| | | Sbjct 21886269 GATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGGAT-TTTGGCTTTGACAT 21886327 Query 35664 TTGCCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| ||| || ||||| | ||||| || || || || | |||| Sbjct 21886328 TATCAATGGTGTCAGAACTC---TCGACCTCGAGAGTGATGGTCTTGCCTGTGAGGGTTT 21886384 Query 35721 TCACAAATATCTGCATTCTGT 35741 ||||||| ||||||| ||||| Sbjct 21886385 TCACAAAGATCTGCA-TCTGT 21886404 >seq6 Length=78779235 Score = 122 bits (134), Expect = 8e-23 Identities = 147/196 (75%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||| |||||||| || | || | | | || || |||||||| || || || Sbjct 3703957 CTCCTTCTGAATATTGTAATCAGCAAGAGTCCTCCCATCTTCAAGCTGCTTCCCTGCGAA 3703898 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| |||||| |||| |||| | |||||| ||| ||||| ||| | || Sbjct 3703897 GATCAACCTCTGCTGATCCGGCGGAATCCCCTCCTTATCCTGTATCTTCGCCTTGAC-GT 3703839 Query 35665 TGCC-ACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | |||||| |||| |||||||||| |||||||| || |||||||| || | Sbjct 3703838 TGTCGATCGTGTCAGAGCTC---TCCACCTCCAAGGTGATCGTCTTCCCCGTCAAGGTCT 3703782 Query 35721 TCACAAATATCTGCAT 35736 | |||||||||||||| Sbjct 3703781 TGACAAATATCTGCAT 3703766 Score = 116 bits (128), Expect = 3e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||||| |||||| || | || |||||| |||||||||||||| || Sbjct 3703764 CCTCCACGAAGCCTCAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCG 3703705 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || || || ||||| ||||| || | || ||||||||| | || Sbjct 3703704 AGAGTCCGGCCATCCTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 3703645 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || ||||||||| |||||| ||| | |||| | | ||||| |||| || Sbjct 3703644 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCAGAGCTC---TC 3703589 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||||| |||||| || || || |||| ||||| || || |||||||||| Sbjct 3703588 GACCTCCAACGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCATTC 3703536 Score = 104 bits (114), Expect = 2e-17 Identities = 144/198 (73%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| || | ||| || | || || ||||| || || || || Sbjct 3703045 CTCCTTTTGGATGTTGTAATCCGCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAA 3702986 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | ||| | | ||||||||| ||||||| |||| | | Sbjct 3702985 GATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTT-GCTTTAACAT 3702927 Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||||| ||||| | ||||| || || || || | ||||||| Sbjct 3702926 TGTCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCA 3702867 Query 35724 CAAATATCTGCATTCTGT 35741 |||| ||||||| ||||| Sbjct 3702866 CAAAGATCTGCA-TCTGT 3702850 >seq8 Length=131339754 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | |||||| |||| || |||||||| ||||| || Sbjct 122668994 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAA 122669053 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||| | | | Sbjct 122669054 AATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 122669113 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || || | ||||| || Sbjct 122669114 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGAC 122669173 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 122669174 GAAGATCTGCAT 122669185 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | || | | | || || |||||||| || ||||| Sbjct 3135346 CTCCTTCTGGATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAA 3135405 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||||| ||| | | ||||| ||| |||||| ||||| | | Sbjct 3135406 GATGAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATT 3135465 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || |||| |||||||||| |||||||| || || || | || || Sbjct 3135466 GTCGATGGTATCCGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCTGTAAGGGTCTT 3135522 Query 35722 CACAAATATCTGCAT 35736 |||||| |||||||| Sbjct 3135523 CACAAAAATCTGCAT 3135537 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||| || || || | ||| || | || || |||||||| || ||||| Sbjct 3136486 CTCCTTTTGGATGTTATAGTCAGCAAGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAA 3136545 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||||| || | || |||||||||| ||| || ||| | | | Sbjct 3136546 AATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATT 3136605 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||| | ||||| ||||| || ||||| || || Sbjct 3136606 GTCGATTGTGTCGGAGCTC---TCGACCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTT 3136662 Query 35722 CACAAATATCTGCAT 35736 ||||| |||||||| Sbjct 3136663 GACAAAAATCTGCAT 3136677 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | ||| | ||| | || ||||||||| |||||||| || || Sbjct 3135539 CCACCACGAAGCCTGAGCACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCT 3135598 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || || | || ||||||||||| || Sbjct 3135599 AGAGTGCGGCCATCCTCGAGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 3135658 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| |||||| ||| | | | | | || || |||| ||| Sbjct 3135659 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTC---TCC 3135715 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || ||||| | ||| ||||| || |||||||| Sbjct 3135716 ACCTCAAGAGTGATGGTCTTCCCCGTAAGAGTCTTCACGAAAATCTGCAT 3135765 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | ||| | || | || ||||||||| ||||||||||| || Sbjct 3135767 CCACCACGAAGCCTGAGCACAAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCTGCA 3135826 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| |||| || |||||||| || || || || | || |||||| |||| || Sbjct 3135827 AGGGTTCGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGG 3135886 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || |||||| ||| ||||| ||| | | | | | || || |||| ||| Sbjct 3135887 ATGCCCTCCTTATCCTGTATCTTGGCCTTGACATTGTCGATTGTATCCGAGCTC---TCC 3135943 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || || ||||| || |||| || || || || || ||||| Sbjct 3135944 ACCTCCAAGGTAATGGTTTTTCCTGTCAGGGTCTTAACGAAAATTTGCAT 3135993 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| || | ||| || |||| || |||||||| |||||||| Sbjct 3136030 CTCCTTTTGGATGTTGTAATCTGCTAGGGTGCGGCCGTCCTCAAGCTGCTTCCCCGCAAA 3136089 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 || | || ||||||||| | || | | ||| |||||| ||| ||| || || | | Sbjct 3136090 AATGAGCCTCTGCTGGTCTGGGGGGATACCCTCTTTGTCC-TGAATTTTGGCTTTGACAT 3136148 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| |||| || ||||| | ||||| ||||| || |||| || | Sbjct 3136149 TGTCGATTGTGTCAGAGCTC---TCGACCTCAAGGGTGATGGTTTTGCCAGTCAGTGTCT 3136205 Query 35721 TCACAAATATCTGCAT 35736 | || || |||||||| Sbjct 3136206 TAACGAAGATCTGCAT 3136221 >seq7 Length=151357931 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/191 (72%), Gaps = 9/191 (5%) Strand=Plus/Plus Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614 ||| |||| || || | ||| || |||| ||||||||||| || ||||| |||| || | Sbjct 149802557 ATGCTGTAGTCTGCGAGGGTGCGGCCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTC 149802616 Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCA-CCGT 35673 || | ||| | || | || |||||||||| |||||| ||||| |||| || | || Sbjct 149802617 TGTTTGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAGCGGT 149802675 Query 35674 GTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 ||| |||| || |||||| ||||| || || || || | || || || || || Sbjct 149802676 GTCCGAGCTC---TCGGCCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAAT 149802732 Query 35731 CTGCATTCTGT 35741 ||||| ||||| Sbjct 149802733 CTGCA-TCTGT 149802742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450727153023360