Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq8 132 5e-26 seq3 125 7e-24 seq6 122 9e-23 seq5 84.2 2e-11 >seq8 Length=131339754 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | ||||||||| || || || ||||| || |||||||||||| | Sbjct 122668959 CCTCCGCGGAGGCGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 122669018 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || ||||| | |||||||| || || || Sbjct 122669019 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGGCGCTGCTGGTCCGGGGGG 122669078 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | ||||| || || || || Sbjct 122669079 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 122669138 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || ||||| || ||||| | ||||| ||||| || ||||| ||| Sbjct 122669139 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCATGTTG 122669189 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| | | ||| || || || ||||| |||||||| |||||||||||| | Sbjct 3136223 CCTCCACGGAGCCTTAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCG 3136282 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || ||||| || || |||||||| | | |||||| || || || Sbjct 3136283 AGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGA 3136342 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || ||||| ||||| ||| | |||||| || || || Sbjct 3136343 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCAACC 3136402 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || |||||||| ||||| || || || || ||||| ||||| Sbjct 3136403 TCAAGCGTGATGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| || || || |||||||| |||||||| || ||| ||| | ||| || Sbjct 3135784 CACAAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCTGCAAGGGTTCGGCCGTCCTC 3135843 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| || || || || || | | ||||||||| || || ||||| || || || || Sbjct 3135844 AAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGGATGCCCTCCTTATCCTG 3135903 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| | ||| || || ||||| || | ||||||||||| Sbjct 3135904 TATCTTGGCCTTGACATTGTCGATTGTATCCGAGCTCTCCACCTCCAAGGTAATGGTTTT 3135963 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || ||||||||||||||||| Sbjct 3135964 TCCTGTCAGGGTCTTAACGAAAATTTGCAT 3135993 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| || || || ||||| |||||||| ||||||||||| | | ||| | || || Sbjct 3135556 CACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCTAGAGTGCGGCCATCCTC 3135615 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| || ||||| || || | | |||||| || || || || ||||| || || || Sbjct 3135616 GAGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTG 3135675 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || || || ||| | || || || ||||| || ||||| ||||| || Sbjct 3135676 GATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTCTCCACCTCAAGAGTGATGGTCTT 3135735 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || |||||||| ||||| Sbjct 3135736 CCCCGTAAGAGTCTTCACGAAAATCTGCAT 3135765 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| ||||| || ||||| ||||| || ||||||||||| | Sbjct 3136679 CCACCCCTGAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 3136738 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || ||||| || || ||||| ||||| | | |||||| || || || Sbjct 3136739 AGAGTACGGCCATCCTCGAGTTGCTTTCCTGCGAAAATGAGCCTCTGCTGGTCTGGGGGG 3136798 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || |||||| ||| | ||||| || ||||| Sbjct 3136799 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATAGTGTCTGAGCTCTCCACC 3136858 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || || || || ||||| Sbjct 3136859 TCAAGGGTGATAGTCTTTCCTGTAAGTGTCTTCACAAAGATCTGCAT 3136905 >seq3 Length=113259003 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || | || ||| ||||| || ||||| ||||| || ||||| ||||| | Sbjct 21885490 CCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCG 21885549 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||||||||| | |||||| || || || Sbjct 21885550 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGG 21885609 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || ||| ||| || ||| | |||||||| ||||| Sbjct 21885610 ATTCCCTCCTTGTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCACT 21885669 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| || ||||||| || || || ||||| ||||| Sbjct 21885670 TCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||| |||||||| || ||||| || | | ||| | ||| || Sbjct 21886192 ACGAGGTGGAGTGTGGACTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCA 21886251 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||||||||| ||||| |||| | ||||| || || || || || || || || || Sbjct 21886252 AGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGG 21886311 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| |||||| || | ||||| || || || |||||||| ||||| || Sbjct 21886312 ATTTTGGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTG 21886371 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||||| || || || ||||| Sbjct 21886372 CCTGTGAGGGTTTTCACAAAGATCTGCAT 21886400 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || ||||| ||||| || ||||||||||| | | ||| | Sbjct 21885043 AGACGAAGCACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGT 21885102 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||||||||| |||| | ||| || || || || || || || Sbjct 21885103 CCATCCTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCC 21885162 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || ||| | |||||||| ||||| || || || Sbjct 21885163 TTGTCCTGGATCTTCGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCACCTCCAGGGTG 21885222 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | || || || ||||| ||||| Sbjct 21885223 ATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 21885260 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || | | ||| | || || || || ||||| || ||||||||||| || Sbjct 21885718 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 21885777 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||| ||||| |||||||||| | |||||| || || || Sbjct 21885778 AGGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGG 21885837 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||| || ||| | ||||| || ||||| Sbjct 21885838 ATGCCCTCCTTGTCCTGAATCTTGGCTTTTACATTGTCGATGGTGTCTGAGCTCTCCACT 21885897 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || || ||||| ||||| Sbjct 21885898 TCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 21885944 >seq6 Length=78779235 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | || || || || || || |||||||| |||||||| || || Sbjct 3703080 CCACCCCTGAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCCGCA 3703021 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||| || || || | ||| ||||| ||||| || Sbjct 3703020 AGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGG 3702961 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || ||| ||| || ||| | ||||| || ||||| || Sbjct 3702960 ATCCCTTCCTTGTCCTGGATCTTTGCTTTAACATTGTCGATGGTGTCAGAGGATTCAACC 3702901 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||||| ||||| || || || ||||| Sbjct 3702900 TCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCACAAAGATCTGCAT 3702854 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || | || ||| | ||| || || || ||||| ||||||||||| || | Sbjct 3703764 CCTCCACGAAGCCTCAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCG 3703705 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || ||||| ||||| || ||||| || | | |||||| || || || Sbjct 3703704 AGAGTCCGGCCATCCTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 3703645 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | ||||| || || || Sbjct 3703644 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACC 3703585 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || ||||| || ||||| | ||||| |||||||| |||||| Sbjct 3703584 TCCAACGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCATT 3703537 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||||||||| || || ||||| || | | || | ||| ||| Sbjct 3703518 ACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCCAGAGTCCGGCCGTCCTCG 3703459 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || || || || | | ||||| || || || ||||| || || ||||| Sbjct 3703458 AGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 3703399 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | || ||||| || || || ||||| |||||||| Sbjct 3703398 ATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGACCTCCAGAGTGATGGTTTTT 3703339 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||| || || || ||||||||||| Sbjct 3703338 CCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310 >seq5 Length=131469567 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| ||||||||||| || ||| |||| || || || Sbjct 128086082 ACAAGATGAAGTGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCTTCC 128086023 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 || ||||| || ||||||||||| | ||||||||| || ||||| || || || || || Sbjct 128086022 AGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCAGGAGGTATCCCCTCCTTATCCTG 128085964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505323904275840