Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 8e-24
seq4 100 3e-16
seq3 93.3 5e-14
seq7 89.7 6e-13
seq5 89.7 6e-13
seq9 86.0 7e-12
>seq2
Length=84732013
Score = 125 bits (138), Expect = 8e-24
Identities = 312/463 (67%), Gaps = 17/463 (4%)
Strand=Plus/Minus
Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827
|||||| |||| ||| | || || ||||| | | || ||||| | ||| |||||
Sbjct 24868654 GCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGGCATCAATCCGCGCTT 24868595
Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887
|| | ||| || |||||||| ||| || |||||| || |||||||| || |||||
Sbjct 24868594 TTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATCCCTTCGACGCAAGCAAA 24868535
Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGC 74947
|||| | | | ||||| | | | | ||||| || | ||||| || ||
Sbjct 24868534 AGCGATCAATCTCTCGGCGAAAGACTCTGAGCCATCGATCCACTTCAGCGCCCACTCGGC 24868475
Query 74948 TTTTCGTTTGAC--CGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTC 75004
|| ||| | |||| |||| || ||||| || || || |||| ||| || ||
Sbjct 24868474 CTTC---TTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAAAGGCGGCTCTTTTCATC 24868418
Query 75005 GGGATCCTTGACG-AGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063
|| ||||||| | || | || | | ||| |||||| |||| || || || ||||
Sbjct 24868417 GGAGTCCTTGATGTAGGAT-TCGAGGAGAAGCGAGTACATCTCGGAGTGGATGTTCTCGA 24868359
Query 75064 TGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAA 75120
|| ||| |||| | ||||||| | || ||||| || | ||| || ||||| |||||
Sbjct 24868358 TGG-CGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGGACCTCCTTCATGAAA 24868300
Query 75121 AATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCA 75180
| | ||| ||||||| |||||||||||| ||||||||||| || || || ||
Sbjct 24868299 CGGCC--GGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGT 24868242
Query 75181 TTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TTTGTCCCA 75220
||| ||||||||||| ||| | || || || ||||||
Sbjct 24868241 GGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCA 24868199
Score = 125 bits (138), Expect = 8e-24
Identities = 312/463 (67%), Gaps = 17/463 (4%)
Strand=Plus/Plus
Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827
|||||| |||| ||| | || || ||||| | | || ||||| | ||| |||||
Sbjct 26602972 GCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGGCATCAATCCGCGCTT 26603031
Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887
|| | ||| || |||||||| ||| || |||||| || |||||||| || |||||
Sbjct 26603032 TTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATCCCTTCGACGCAAGCAAA 26603091
Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGC 74947
|||| | | | ||||| | | | | ||||| || | ||||| || ||
Sbjct 26603092 AGCGATCAATCTCTCGGCGAAAGACTCTGAGCCATCGATCCACTTCAGCGCCCACTCGGC 26603151
Query 74948 TTTTCGTTTGAC--CGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTC 75004
|| ||| | |||| |||| || ||||| || || || |||| ||| || ||
Sbjct 26603152 CTTC---TTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAAAGGCGGCTCTTTTCATC 26603208
Query 75005 GGGATCCTTGACG-AGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063
|| ||||||| | || | || | | ||| |||||| |||| || || || ||||
Sbjct 26603209 GGAGTCCTTGATGTAGGAT-TCGAGGAGAAGCGAGTACATCTCGGAGTGGATGTTCTCGA 26603267
Query 75064 TGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAA 75120
|| ||| |||| | ||||||| | || ||||| || | ||| || ||||| |||||
Sbjct 26603268 TGG-CGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGGACCTCCTTCATGAAA 26603326
Query 75121 AATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCA 75180
| | ||| ||||||| |||||||||||| ||||||||||| || || || ||
Sbjct 26603327 CGGCC--GGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGT 26603384
Query 75181 TTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TTTGTCCCA 75220
||| ||||||||||| ||| | || || || ||||||
Sbjct 26603385 GGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCA 26603427
Score = 89.7 bits (98), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||||||| |||| | || |||| ||||||||||||||||||||||||||| |||||
Sbjct 82426000 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 82426059
Query 79684 TGAGCTACGAAAGC 79697
||||||||||||||
Sbjct 82426060 TGAGCTACGAAAGC 82426073
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 11387191 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 11387250
Query 79684 TGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 11387251 TGAGCTATGAAAGC 11387264
>seq4
Length=146560859
Score = 100 bits (110), Expect = 3e-16
Identities = 71/80 (89%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 79621 AGACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-AC 79679
||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||
Sbjct 69181994 AGAGTGCTTTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAAC 69181935
Query 79680 CAATTGAGCTACGAAAGCAA 79699
||| ||||||||||||||||
Sbjct 69181934 CAACTGAGCTACGAAAGCAA 69181915
>seq3
Length=113259003
Score = 93.3 bits (102), Expect = 5e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 79623 ACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCA 79681
|||||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||
Sbjct 68256621 ACTGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCA 68256680
Query 79682 ATTGAGCTACGAAAGC 79697
| ||||||||||||||
Sbjct 68256681 ACTGAGCTACGAAAGC 68256696
Score = 89.7 bits (98), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||||||| |||| | || |||| ||||||||||||||||||||||||||| |||||
Sbjct 15782792 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 15782851
Query 79684 TGAGCTACGAAAGC 79697
||||||||||||||
Sbjct 15782852 TGAGCTACGAAAGC 15782865
>seq7
Length=151357931
Score = 89.7 bits (98), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||||||| |||| | || |||| ||||||||||||||||||||||||||| |||||
Sbjct 43577848 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 43577789
Query 79684 TGAGCTACGAAAGC 79697
||||||||||||||
Sbjct 43577788 TGAGCTACGAAAGC 43577775
Score = 86.0 bits (94), Expect = 7e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 79629 TTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAATTGAG 79687
|||| |||| | || |||| ||||||||||||||||||||||||||| ||||| ||||
Sbjct 131598612 TTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAACTGAG 131598671
Query 79688 CTACGAAAGCAA 79699
||||||||||||
Sbjct 131598672 CTACGAAAGCAA 131598683
>seq5
Length=131469567
Score = 89.7 bits (98), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||||||| |||| | || |||| ||||||||||||||||||||||||||| |||||
Sbjct 2599015 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 2599074
Query 79684 TGAGCTACGAAAGC 79697
||||||||||||||
Sbjct 2599075 TGAGCTACGAAAGC 2599088
>seq9
Length=68543460
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 4965743 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 4965684
Query 79684 TGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 4965683 TGAGCTATGAAAGC 4965670
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 61825902 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 61825961
Query 79684 TGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 61825962 TGAGCTATGAAAGC 61825975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547135340361600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |