Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8 111 1e-19 seq6 102 6e-17 seq3 100 2e-16 seq5 95.1 8e-15 >seq8 Length=131339754 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || || || || ||||| ||||| || || || || | | Sbjct 3136221 ATGCAGATCTTCGTTAAGACACTGACTGGCAAAACCATCACCCTTGAGGTCGAGAGCTCT 3136162 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | |||| || |||||||| ||| | || ||||| || Sbjct 3136161 GACACAATCGACAATGTCAAAGCCAAAA-TTCAGGACAAAGAGGGTATCCCCCCAGACCA 3136103 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || |||| ||||| ||| |||||||| Sbjct 3136102 GCAGAGGCTCATTTTTGCGGGGAAGCAGCTTGAGGACGGCCGCACCCTAGCAGATTACAA 3136043 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| |||||||| Sbjct 3136042 CATCCAAAAGGAGTCCAC 3136025 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || || ||||| ||||| || || ||||| | | Sbjct 3136449 ATGCAGATTTTTGTCAAGACCTTGACCGGCAAAACCATCACGCTTGAGGTTGAGAGCTCT 3136390 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||||| ||||| || || | || ||||| || Sbjct 3136389 GACACAATCGACAATGTCAAGGC-CAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCA 3136331 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || || || || || | || ||| | | ||| ||||| Sbjct 3136330 GCAGAGGCTTATTTTTGCCGGGAAGCAGCTTGAGGATGGTCGTACTCTCGCCGACTACAA 3136271 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| |||||||| | ||| | || ||||| | || ||||| Sbjct 3136270 CATCCAAAAGGAGTCCACCCTCCATCTTGTGCTAAGGCTCCGTGGAGG 3136223 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| ||||||||||| || || || ||||| ||||| || || ||| Sbjct 122669188 AACATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCC 122669129 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| | || ||| | || | || || ||||| || || | || || || Sbjct 122669128 TCGGACACGATCGACAATGTCAAGGC-CAAGATCCAAGACAAGGAGGGGATCCCCCCGGA 122669070 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || || || || || || || |||| || || ||| ||| || Sbjct 122669069 CCAGCAGCGCCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCCGACTA 122669010 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 122669009 CAACATCCAGAAGGAGTCGAC 122668989 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || ||||| || || |||||||| || || || | || Sbjct 3135765 ATGCAGATTTTCGTGAAGACTCTTACGGGGAAGACCATCACTCTTGAGGTGGAGAGCTCG 3135706 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| |||| | || || ||||| ||||| | || || || || Sbjct 3135705 GATACCATTGACAATGTTAAGGC-CAAGATCCAGGACAAGGAAGGAATCCCCCCGGACCA 3135647 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || || || || || | |||||| ||| || ||||| Sbjct 3135646 GCAGAGGCTCATCTTCGCAGGAAAGCAGCTCGAGGATGGCCGCACTCTAGCAGACTACAA 3135587 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| |||||||| Sbjct 3135586 CATCCAAAAGGAGTCCAC 3135569 >seq6 Length=78779235 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || || || || ||||| ||||| ||||| ||| | Sbjct 3702854 ATGCAGATCTTTGTGAAAACACTAACCGGCAAGACAATCACACTCGAGGTTGAATCCTCT 3702913 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| ||||| |||| | | ||||| ||||| | || || || || Sbjct 3702914 GACACCATCGACAATGTTAAAGCAAAGA-TCCAGGACAAGGAAGGGATCCCTCCCGACCA 3702972 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || || |||||||| || || || | || || | | |||||||| Sbjct 3702973 GCAACGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGCCGGACCCTTGCGGATTACAA 3703032 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| ||||| || Sbjct 3703033 CATCCAAAAGGAGTCTAC 3703050 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| |||||||| || || || || ||||| | || || || | | Sbjct 3703537 AATGCAGATTTTCGTCAAAACCCTGACCGGCAAGACCATCACGTTGGAGGTCGAGAGCTC 3703596 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| || || | || || || || Sbjct 3703597 TGACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 3703656 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| |||||||| || || | || ||| | | |||||||| Sbjct 3703657 GCAGAGGCTCATCTTTGCCGGTAAACAACTCGAGGATGGCCGGACTCTCGCTGATTACAA 3703716 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||| || | || || || | ||| | || ||||| Sbjct 3703717 CATTCAGAAGGAGTCGACCCTCCACTTGGTGCTGAGGCTTCGTGGAGG 3703764 >seq3 Length=113259003 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| || || || ||||||||||| || || | Sbjct 21886400 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACTCTCGAGGTCGAGAGTTCT 21886341 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| || || | || || || || Sbjct 21886340 GACACCATTGATAATGTCAAAGCCAAAA-TCCAGGACAAGGAGGGGATCCCCCCTGACCA 21886282 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || |||||||||||||| || || |||| || || | | |||||||| Sbjct 21886281 GCAAAGACTGATCTTTGCCGGCAAACAGCTTGAGGACGGCCGTACCCTCGCTGATTACAA 21886222 Query 23790 CATACAAAAAGAGTCCACA 23808 || ||||| ||||||||| Sbjct 21886221 TATCCAAAAGGAGTCCACA 21886203 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| ||||| || || || || |||||| | ||||| || | | Sbjct 21885488 ATGCAGATTTTTGTTAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTCC 21885429 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | ||| || ||||| || || | || ||||| || Sbjct 21885428 GACACCATCGACAATGTGAAAGC-AAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 21885370 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||| || || || || | || || || | ||||| || Sbjct 21885369 GCAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGAACGTTGGCGGATTATAA 21885310 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 21885309 CATTCAGAAGGAGTCCAC 21885292 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| | ||||| || | | Sbjct 21885716 ATGCAGATTTTTGTCAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTCC 21885657 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| |||| | | ||||| || || | || ||||| || Sbjct 21885656 GACACCATCGACAATGTGAAAGCAAAGA-TCCAGGACAAGGAGGGAATCCCCCCAGACCA 21885598 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||||||||| || || || || | ||||| | | || || || Sbjct 21885597 GCAGAGGTTGATTTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTATAA 21885538 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 21885537 CATCCAGAAGGAGTCCAC 21885520 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| || || || ||||| || ||||| || | | Sbjct 21885944 ATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACTATCACCCTTGAAGTGGAGAGCTCA 21885885 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| || ||| ||||| || || | || ||||| || Sbjct 21885884 GACACCATCGACAATGTAAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 21885825 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| ||||| || |||| || | || || | | || |||||| Sbjct 21885824 CAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAGGATGGCCGTACCCTTGCTGACTACAAC 21885765 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | ||||| || | ||| || | ||||| Sbjct 21885764 ATCCAGAAGGAGTCGACCCTCCATTTGGTGCTCAGGCTGAGGGGAGG 21885718 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || || ||||| |||||||| ||||| | | Sbjct 21886172 ATGCAGATTTTCGTCAAGACCCTCACTGGGAAGACGATTACTCTCGAGGTTGAGAGCTCC 21886113 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | ||||| || || ||||| || || | || ||||| || Sbjct 21886112 GATACCATTGACAATGTAAAAGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 21886053 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || || || || | || || | | || || ||| Sbjct 21886052 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCTGACTATAAC 21885993 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | ||||| || | ||| || | ||||| Sbjct 21885992 ATCCAGAAGGAGTCTACCCTCCATTTGGTGCTCAGGCTGAGGGGAGG 21885946 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| || || || ||||| || || || || | | Sbjct 21885260 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGAGCTCC 21885201 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || || ||||| || || | || || || || Sbjct 21885200 GACACGATTGACAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGGATCCCTCCGGACCA 21885142 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| ||||| || ||||| || | ||| || | | || ||||| Sbjct 21885141 ACAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGACGTACCCTCGCGGACTACAA 21885082 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || ||||||||| Sbjct 21885081 CATCCAGAAGGAGTCCACA 21885063 >seq5 Length=131469567 Score = 95.1 bits (104), Expect = 8e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 || ||||| ||| |||| || ||||| ||| | |||| ||||| || || ||| ||||| Sbjct 77212061 GATAAAGAGGGTATACCTCCTGATCAGCAGAGGCTAATTTTTGCTGGAAAGCAATTGGAA 77212120 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | | | || | | |||||||||||||| |||||||| || | ||| ||||||| Sbjct 77212121 GATGGAAGGACCCTGGCTGATTACAACATACAGAAAGAGTCAACTCTTCATCTAGTTTTG 77212180 Query 23824 AGGTTGCGAGGAGGA 23838 ||| | |||||||| Sbjct 77212181 AGGCTTAGAGGAGGA 77212195 Score = 82.4 bits (90), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 23708 AAGAAGGTG-TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC 23766 ||| ||| | |||| || ||||| ||| | || || ||||| || |||||||||||||| Sbjct 128085970 AAGGAGGGGATACCTCCTGATCAGCAGAGGTTGATTTTTGCTGGAAAACAACTGGAAGAT 128086029 Query 23767 GAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGG 23826 | ||||| | | ||||||||||| || || ||||| ||| | ||| | ||| | ||| Sbjct 128086030 GGTCGCACCCTTGCTGATTACAACATTCAGAAGGAGTCAACACTTCATCTTGTTCTCAGG 128086089 Query 23827 TTGCGAGGAGGATCA 23841 || | || ||| || Sbjct 128086090 CTGAGGGGTGGAACA 128086104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337961022950336