Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq8 111 1e-19
seq6 102 6e-17
seq3 100 2e-16
seq5 95.1 8e-15
>seq8
Length=131339754
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| || || || || ||||| ||||| || || || || | |
Sbjct 3136221 ATGCAGATCTTCGTTAAGACACTGACTGGCAAAACCATCACCCTTGAGGTCGAGAGCTCT 3136162
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | ||| | |||| || |||||||| ||| | || ||||| ||
Sbjct 3136161 GACACAATCGACAATGTCAAAGCCAAAA-TTCAGGACAAAGAGGGTATCCCCCCAGACCA 3136103
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || || || || |||| ||||| ||| ||||||||
Sbjct 3136102 GCAGAGGCTCATTTTTGCGGGGAAGCAGCTTGAGGACGGCCGCACCCTAGCAGATTACAA 3136043
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||||||
Sbjct 3136042 CATCCAAAAGGAGTCCAC 3136025
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||| | || || ||||| ||||| || || ||||| | |
Sbjct 3136449 ATGCAGATTTTTGTCAAGACCTTGACCGGCAAAACCATCACGCTTGAGGTTGAGAGCTCT 3136390
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | ||||| ||||| || || | || ||||| ||
Sbjct 3136389 GACACAATCGACAATGTCAAGGC-CAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCA 3136331
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| || || || || || | || ||| | | ||| |||||
Sbjct 3136330 GCAGAGGCTTATTTTTGCCGGGAAGCAGCTTGAGGATGGTCGTACTCTCGCCGACTACAA 3136271
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| |||||||| | ||| | || ||||| | || |||||
Sbjct 3136270 CATCCAAAAGGAGTCCACCCTCCATCTTGTGCTAAGGCTCCGTGGAGG 3136223
Score = 95.1 bits (104), Expect = 8e-15
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| ||||||||||| || || || ||||| ||||| || || |||
Sbjct 122669188 AACATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCC 122669129
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| | || ||| | || | || || ||||| || || | || || ||
Sbjct 122669128 TCGGACACGATCGACAATGTCAAGGC-CAAGATCCAAGACAAGGAGGGGATCCCCCCGGA 122669070
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||||| | || || || || || || || || |||| || || ||| ||| ||
Sbjct 122669069 CCAGCAGCGCCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCCGACTA 122669010
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||| ||
Sbjct 122669009 CAACATCCAGAAGGAGTCGAC 122668989
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || || ||||| || || |||||||| || || || | ||
Sbjct 3135765 ATGCAGATTTTCGTGAAGACTCTTACGGGGAAGACCATCACTCTTGAGGTGGAGAGCTCG 3135706
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| |||| | || || ||||| ||||| | || || || ||
Sbjct 3135705 GATACCATTGACAATGTTAAGGC-CAAGATCCAGGACAAGGAAGGAATCCCCCCGGACCA 3135647
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || || || || || || || || || | |||||| ||| || |||||
Sbjct 3135646 GCAGAGGCTCATCTTCGCAGGAAAGCAGCTCGAGGATGGCCGCACTCTAGCAGACTACAA 3135587
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||||||
Sbjct 3135586 CATCCAAAAGGAGTCCAC 3135569
>seq6
Length=78779235
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| || || || || || ||||| ||||| ||||| ||| |
Sbjct 3702854 ATGCAGATCTTTGTGAAAACACTAACCGGCAAGACAATCACACTCGAGGTTGAATCCTCT 3702913
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| ||||| |||| | | ||||| ||||| | || || || ||
Sbjct 3702914 GACACCATCGACAATGTTAAAGCAAAGA-TCCAGGACAAGGAAGGGATCCCTCCCGACCA 3702972
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| ||| | || || || |||||||| || || || | || || | | ||||||||
Sbjct 3702973 GCAACGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGCCGGACCCTTGCGGATTACAA 3703032
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||| ||
Sbjct 3703033 CATCCAAAAGGAGTCTAC 3703050
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| |||||||| || || || || ||||| | || || || | |
Sbjct 3703537 AATGCAGATTTTCGTCAAAACCCTGACCGGCAAGACCATCACGTTGGAGGTCGAGAGCTC 3703596
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || | | || || || ||||| || || | || || || ||
Sbjct 3703597 TGACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 3703656
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| |||||||| || || | || ||| | | ||||||||
Sbjct 3703657 GCAGAGGCTCATCTTTGCCGGTAAACAACTCGAGGATGGCCGGACTCTCGCTGATTACAA 3703716
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || ||||| || | || || || | ||| | || |||||
Sbjct 3703717 CATTCAGAAGGAGTCGACCCTCCACTTGGTGCTGAGGCTTCGTGGAGG 3703764
>seq3
Length=113259003
Score = 100 bits (110), Expect = 2e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||||||||| || || || ||||||||||| || || |
Sbjct 21886400 ATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACTCTCGAGGTCGAGAGTTCT 21886341
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||| | ||||| || || | || || || ||
Sbjct 21886340 GACACCATTGATAATGTCAAAGCCAAAA-TCCAGGACAAGGAGGGGATCCCCCCTGACCA 21886282
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | | || |||||||||||||| || || |||| || || | | ||||||||
Sbjct 21886281 GCAAAGACTGATCTTTGCCGGCAAACAGCTTGAGGACGGCCGTACCCTCGCTGATTACAA 21886222
Query 23790 CATACAAAAAGAGTCCACA 23808
|| ||||| |||||||||
Sbjct 21886221 TATCCAAAAGGAGTCCACA 21886203
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| ||||| ||||| || || || || |||||| | ||||| || | |
Sbjct 21885488 ATGCAGATTTTTGTTAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTCC 21885429
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | ||| | ||| || ||||| || || | || ||||| ||
Sbjct 21885428 GACACCATCGACAATGTGAAAGC-AAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 21885370
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| ||||| || || || || | || || || | ||||| ||
Sbjct 21885369 GCAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGAACGTTGGCGGATTATAA 21885310
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 21885309 CATTCAGAAGGAGTCCAC 21885292
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||||| || || || || |||||| | ||||| || | |
Sbjct 21885716 ATGCAGATTTTTGTCAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTCC 21885657
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | ||| |||| | | ||||| || || | || ||||| ||
Sbjct 21885656 GACACCATCGACAATGTGAAAGCAAAGA-TCCAGGACAAGGAGGGAATCCCCCCAGACCA 21885598
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||||||||| || || || || | ||||| | | || || ||
Sbjct 21885597 GCAGAGGTTGATTTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTATAA 21885538
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 21885537 CATCCAGAAGGAGTCCAC 21885520
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || |||||||| || || || ||||| || ||||| || | |
Sbjct 21885944 ATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACTATCACCCTTGAAGTGGAGAGCTCA 21885885
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | ||||| || ||| ||||| || || | || ||||| ||
Sbjct 21885884 GACACCATCGACAATGTAAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 21885825
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||| || |||| || | || || | | || ||||||
Sbjct 21885824 CAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAGGATGGCCGTACCCTTGCTGACTACAAC 21885765
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || ||||| || | ||||| || | ||| || | |||||
Sbjct 21885764 ATCCAGAAGGAGTCGACCCTCCATTTGGTGCTCAGGCTGAGGGGAGG 21885718
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| || || ||||| |||||||| ||||| | |
Sbjct 21886172 ATGCAGATTTTCGTCAAGACCCTCACTGGGAAGACGATTACTCTCGAGGTTGAGAGCTCC 21886113
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | ||||| || || ||||| || || | || ||||| ||
Sbjct 21886112 GATACCATTGACAATGTAAAAGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 21886053
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| || || || || || || | || || | | || || |||
Sbjct 21886052 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCTGACTATAAC 21885993
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || ||||| || | ||||| || | ||| || | |||||
Sbjct 21885992 ATCCAGAAGGAGTCTACCCTCCATTTGGTGCTCAGGCTGAGGGGAGG 21885946
Score = 86.0 bits (94), Expect = 4e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || |||||||| || || || ||||| || || || || | |
Sbjct 21885260 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGAGCTCC 21885201
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| || || | || || || ||
Sbjct 21885200 GACACGATTGACAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGGATCCCTCCGGACCA 21885142
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || ||||| ||||| || ||||| || | ||| || | | || |||||
Sbjct 21885141 ACAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGACGTACCCTCGCGGACTACAA 21885082
Query 23790 CATACAAAAAGAGTCCACA 23808
||| || || |||||||||
Sbjct 21885081 CATCCAGAAGGAGTCCACA 21885063
>seq5
Length=131469567
Score = 95.1 bits (104), Expect = 8e-15
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
|| ||||| ||| |||| || ||||| ||| | |||| ||||| || || ||| |||||
Sbjct 77212061 GATAAAGAGGGTATACCTCCTGATCAGCAGAGGCTAATTTTTGCTGGAAAGCAATTGGAA 77212120
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | | | || | | |||||||||||||| |||||||| || | ||| |||||||
Sbjct 77212121 GATGGAAGGACCCTGGCTGATTACAACATACAGAAAGAGTCAACTCTTCATCTAGTTTTG 77212180
Query 23824 AGGTTGCGAGGAGGA 23838
||| | ||||||||
Sbjct 77212181 AGGCTTAGAGGAGGA 77212195
Score = 82.4 bits (90), Expect = 5e-11
Identities = 100/135 (74%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 23708 AAGAAGGTG-TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC 23766
||| ||| | |||| || ||||| ||| | || || ||||| || ||||||||||||||
Sbjct 128085970 AAGGAGGGGATACCTCCTGATCAGCAGAGGTTGATTTTTGCTGGAAAACAACTGGAAGAT 128086029
Query 23767 GAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGG 23826
| ||||| | | ||||||||||| || || ||||| ||| | ||| | ||| | |||
Sbjct 128086030 GGTCGCACCCTTGCTGATTACAACATTCAGAAGGAGTCAACACTTCATCTTGTTCTCAGG 128086089
Query 23827 TTGCGAGGAGGATCA 23841
|| | || ||| ||
Sbjct 128086090 CTGAGGGGTGGAACA 128086104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337961022950336
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