Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 7e-17
>seq2
Length=84732013
Score = 102 bits (112), Expect = 7e-17
Identities = 534/845 (63%), Gaps = 18/845 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| || ||| | ||| |||||||| || || || || | ||||||||
Sbjct 24868965 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 24868906
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| |||||||||| || | || || |||||| | | ||| | | |
Sbjct 24868905 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 24868846
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
|| |||||||| || ||||| ||||| | ||||| || || | || || || | ||
Sbjct 24868845 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 24868786
Query 4437 CTCACAGGTAGCGCGTATGTCAAA--AACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
|| || || || || |||| ||||| |||| ||| || || || | | |
Sbjct 24868785 GCAACCGGCAGAGC--ATCGCAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 24868728
Query 4495 TATCTTTTATTTTATCTTT----AGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550
| | || | | |||| || | ||| | | || || |||| || ||
Sbjct 24868727 TCCCCTTCACACTCTCTTCGCTCAGCTTGTTGTTCAGCAGAGAAT----ACAACAAGCAA 24868672
Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610
|| ||||| ||||| | |||||||||| || || ||||| ||||| ||||| ||
Sbjct 24868671 GCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCC 24868612
Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670
||||| || || | |||||||||||| || || || ||| ||| || ||||| ||
Sbjct 24868611 GGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATC 24868552
Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730
||||| ||| ||||| || | |||| |||| || || || | | | |||
Sbjct 24868551 CCTTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAAGA-CT--CTGAGCCATCGATC 24868495
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
|| || | ||||| | || || || ||||| || || || | || |||| |||
Sbjct 24868494 CACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAA 24868435
Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850
| || |||||| | ||| | || || | || | || || ||||| ||
Sbjct 24868434 AGGCGGCTCTTTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATCTCG 24868375
Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910
|| || || || || || || ||||| || ||||| ||| || || || | || ||
Sbjct 24868374 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGG 24868315
Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970
|| || || || | | | | ||| || || || ||||| ||| || ||
Sbjct 24868314 ACCTCCTTCATGAAACGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGCGAAG 24868255
Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAG-GCTTAAGTTTT--TTCCAGTGG 5027
|| || | || || | | |||| | ||||| | | ||| | ||| | |||||||
Sbjct 24868254 AAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCAGTGG 24868195
Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087
| | ||||| | | ||| || || || | ||||| ||||| || || || || |||
Sbjct 24868194 CGGATATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTG 24868135
Query 5088 TACAT 5092
|||||
Sbjct 24868134 TACAT 24868130
Score = 102 bits (112), Expect = 7e-17
Identities = 534/845 (63%), Gaps = 18/845 (2%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| || ||| | ||| |||||||| || || || || | ||||||||
Sbjct 26602661 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 26602720
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| |||||||||| || | || || |||||| | | ||| | | |
Sbjct 26602721 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 26602780
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
|| |||||||| || ||||| ||||| | ||||| || || | || || || | ||
Sbjct 26602781 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 26602840
Query 4437 CTCACAGGTAGCGCGTATGTCAAA--AACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
|| || || || || |||| ||||| |||| ||| || || || | | |
Sbjct 26602841 GCAACCGGCAGAGC--ATCGCAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 26602898
Query 4495 TATCTTTTATTTTATCTTT----AGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550
| | || | | |||| || | ||| | | || || |||| || ||
Sbjct 26602899 TCCCCTTCACACTCTCTTCGCTCAGCTTGTTGTTCAGCAGAGAAT----ACAACAAGCAA 26602954
Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610
|| ||||| ||||| | |||||||||| || || ||||| ||||| ||||| ||
Sbjct 26602955 GCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCC 26603014
Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670
||||| || || | |||||||||||| || || || ||| ||| || ||||| ||
Sbjct 26603015 GGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAAATC 26603074
Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730
||||| ||| ||||| || | |||| |||| || || || | | | |||
Sbjct 26603075 CCTTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAAGA-CT--CTGAGCCATCGATC 26603131
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
|| || | ||||| | || || || ||||| || || || | || |||| |||
Sbjct 26603132 CACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAA 26603191
Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850
| || |||||| | ||| | || || | || | || || ||||| ||
Sbjct 26603192 AGGCGGCTCTTTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATCTCG 26603251
Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910
|| || || || || || || ||||| || ||||| ||| || || || | || ||
Sbjct 26603252 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGG 26603311
Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970
|| || || || | | | | ||| || || || ||||| ||| || ||
Sbjct 26603312 ACCTCCTTCATGAAACGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGCGAAG 26603371
Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAG-GCTTAAGTTTT--TTCCAGTGG 5027
|| || | || || | | |||| | ||||| | | ||| | ||| | |||||||
Sbjct 26603372 AAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCAGTGG 26603431
Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087
| | ||||| | | ||| || || || | ||||| ||||| || || || || |||
Sbjct 26603432 CGGATATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTG 26603491
Query 5088 TACAT 5092
|||||
Sbjct 26603492 TACAT 26603496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426988226566736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |