Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=48772488 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179 || || || |||||||| || | |||||||| ||||||||| || || || || || Sbjct 6731563 ACTTGTGCAATCATACATGTCAGAAGAGAATATGAAGCAATGTTGAATGGTACACCAAGG 6731622 Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA-TCACACACATAAAA 97238 ||||||||||| || | |||||| | |||||| || | || ||| || || |||||||| Sbjct 6731623 CCCATATCAGCAGAACGTTGATACATCTGACATGATAACTCCCCATTCTCA-ACATAAAA 6731681 Query 97239 CTG 97241 ||| Sbjct 6731682 CTG 6731684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783881659960