Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=48772488 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| |||| ||| || || || ||||| ||||||||||| || ||||||||| Sbjct 6731684 CAGTTTTATGTTGAGAATGGGGAGTTATCATGTCAGATGTATCAACGTTCTGCTGATATG 6731625 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || ||||| || ||||| ||||| ||| | || || || | |||||||||||| Sbjct 6731624 GGCCTTGGTGTACCATTCAACATTGCTTCATATTCTCTTCTGACATGTATGATTGCACAA 6731565 Query 20551 GTT 20553 ||| Sbjct 6731564 GTT 6731562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183863778460