Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2 132 4e-26 seq3 120 2e-22 seq1 95.1 1e-14 >seq2 Length=59384932 Score = 132 bits (146), Expect = 4e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 |||| || |||| || | |||| |||||||||| ||||||||| |||||||||||| Sbjct 10639227 CGCCTCCCCTCAGTCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGG 10639286 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 || ||| |||| ||||| || || |||||||| || | |||||| ||||| || | Sbjct 10639287 CGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGTG 10639346 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | |||||||| ||| || || ||| || | | | ||||| ||||| Sbjct 10639347 GGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCA 10639406 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||||| || || ||||| ||||| || |||||||| ||||| ||||| ||| Sbjct 10639407 CCTCCAGCGTGATGGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 10639459 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| || ||| |||| || Sbjct 34837796 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 34837855 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || | ||||| ||||| || || | |||||||||||| Sbjct 34837856 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 34837915 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||||||||||| || || |||||| Sbjct 34837916 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTG 34837975 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||||||| |||||||| ||||| ||||| || Sbjct 34837976 CCCGTCAGGGTCTTCACGAAGATCTGCATCTT 34838007 >seq3 Length=59935730 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| | |||||||||| ||| ||| |||| ||||| || Sbjct 31827589 GTGGAGGGTGGACTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCCAGCTG 31827648 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | |||||| || || || || || |||||||||||| | || Sbjct 31827649 CTTCCCGGCGAAGATGAGCCGCTGCTGCTCCGGCGGGACCCCCTCCTTGTCCTGCACCTT 31827708 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| ||||||||||| || |||||||| ||||| Sbjct 31827709 GGCCTTCACGTTCTCGATCGTGTCCGATGACTCCACCTCCAGCGTGATCGTCTTCCCCGT 31827768 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||| |||||||| ||||| ||||| Sbjct 31827769 CAGCGTCTTCACGAAGATCTGCAT 31827792 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| ||||||||||| || |||| | || ||||| || Sbjct 2681721 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCCTCCAGCTG 2681780 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| ||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 2681781 CTTTCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 2681840 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||||| ||| || |||||||| || Sbjct 2681841 GGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGT 2681900 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 2681901 GAGGGTCTTGACGAAGATCTGCAT 2681924 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| ||||||||||| || ||| | || ||| Sbjct 3233926 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCC 3233985 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 3233986 AGCTGCTTCCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 3234045 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||||| ||| || |||||| Sbjct 3234046 ATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAAGGTGATGGTCTTG 3234105 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| |||||||| |||||| Sbjct 3234106 CCGGTGAGGGTCTTGACAAAGATCTGCATG 3234135 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||||||||||||||| || |||| | || ||||| || Sbjct 2682177 GTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTG 2682236 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||| ||| || || Sbjct 2682237 CTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTT 2682296 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| | | | |||| ||| ||||| | ||| || |||||||| || Sbjct 2682297 GGCCTTAACGTTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 2682356 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||||||| ||||| Sbjct 2682357 CAAAGTCTTCACAAAGATCTGCAT 2682380 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| ||||||||||| || ||| | || ||||| || Sbjct 3234387 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTG 3234446 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 3234447 CTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 3234506 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| ||||||| ||| || |||||||| || Sbjct 3234507 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCGGT 3234566 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| Sbjct 3234567 GAGGGTCTTGACAAAGATCTGCAT 3234590 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| ||||||||||| || ||| | || ||||| || Sbjct 3234159 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTG 3234218 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||| ||||| || || | |||||||||||| || || Sbjct 3234219 CTTCCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 3234278 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| ||||||| ||| || |||||||| || Sbjct 3234279 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGT 3234338 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||| |||||| Sbjct 3234339 GAGGGTCTTGACAAAGATCTGCATG 3234363 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||| ||||||||| |||||||| || ||| ||| |||| || || || Sbjct 13693470 GTGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGCCCGTCCTCAAGCTG 13693411 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||| ||||| || || | ||||||||||| ||| || Sbjct 13693410 CTTCCCAGCAAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTT 13693351 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| | ||| ||||||| || || ||||| || || Sbjct 13693350 CGCCTTGACGTTGTCGATTGTGTCCGAAGACTCAACCTCCAAAGTGATGGTCTTACCAGT 13693291 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||| |||||| Sbjct 13693290 AAGCGTCTTGACAAAGATCTGCATG 13693266 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTG 45192 || || ||| |||||| || |||||||| || | | || | || | || ||||| || Sbjct 53306952 TGAAGAGTGGACTCCTTTTGGATGTTGTAATCTGCTAAGGTA-CGCCCATCCTCCAGCTG 53307010 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 |||||||| || || | || ||| || || ||||| | |||||||||||| ||| || Sbjct 53307011 CTTTCCGGCAAAGATGAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGAATCTT 53307070 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | || || ||||| || || Sbjct 53307071 GGCCTTCACGTTATCAATGGTGTCAGAGCTCTCCACCTCAAGCGTGATGGTCTTTCCAGT 53307130 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||||||||| Sbjct 53307131 CAATGTCTTGACAAAGATTTGCAT 53307154 Score = 89.7 bits (98), Expect = 4e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| || ||| |||||||| |||||||| || |||| | || || || | Sbjct 13692786 GTGCAGGGTAGACTCTTTCTGAATATTGTAGTCCGCCAAGGTGCGACCATCCTCAAGCTA 13692727 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | ||||| ||||| ||||| | |||||||| || |||||| Sbjct 13692726 CTTCCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGAATTTT 13692667 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | |||| ||| ||||| | |||||| |||||||| || Sbjct 13692666 TGCCTTCACATTATCGATCGTGTCAGATGACTCGACCTCAAGGGTAATTGTCTTGCCAGT 13692607 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||| Sbjct 13692606 GAG-GTCTTCACAAAAATCTGCAT 13692584 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| || ||||| || || | || | || || || || |||||||| || Sbjct 53307191 CTCCTTCTGGATATTGTAATCAGCCAATGTACGGCCATCCTCAAGCTGCTTTCCGGCAAA 53307250 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||| ||||| || || | |||||||| ||| ||| ||| ||| || Sbjct 53307251 GATAAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGAATCTTTGCCTTCACATT 53307310 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||| ||||||| || || ||||| || || || ||||| || Sbjct 53307311 GTCAATGGTGTCAGAGCTCTCGACCTCCAGAGTTATGGTCTTCCCTGTAAGTGTCTTAAC 53307370 Query 45325 AAAGATTTGCAT 45336 |||||||||||| Sbjct 53307371 AAAGATTTGCAT 53307382 >seq1 Length=75119905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| |||||| || ||||||||||| ||| ||| | || || Sbjct 28416016 ACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCA 28415957 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | || ||| ||||| || || | |||||||||||| Sbjct 28415956 AGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 28415897 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| | ||| ||||| | || || |||||| Sbjct 28415896 ATCTTTGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGCGTGATGGTCTTG 28415837 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| |||||||| |||||| Sbjct 28415836 CCGGTGAGGGTCTTGACAAAGATCTGCATG 28415807 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| || ||||| |||||||| || || ||| | || ||||| || Sbjct 27881061 GTGGAGGGTGGACTATTTCTGGATGTTGTAATCCGCGAGAGTGCGCCCATCCTCCAGCTG 27881120 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 27881121 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGAGGCCCTCCTTGTCCTGGATCTT 27881180 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | |||| | ||| |||| | |||||| |||||||| || Sbjct 27881181 TGACTTGACATTGTCGATCGTGTCGGAAGACTCGACCTAGAGGGTAATGGTCTTGCCGGT 27881240 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||||||||||||||||| ||||| Sbjct 27881241 GAGAGTCTTCACAAAGATCTGCAT 27881264 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| |||||||||||||||||| || || ||| | || || Sbjct 28210515 ACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGGCCATCCTCA 28210456 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | ||||| ||||| || || | |||||||||||| Sbjct 28210455 AGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 28210396 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | ||||| | || ||||||| || || ||||| Sbjct 28210395 ATCTTTGCCTTCACGTTGTCAATGGTGTCCGAAGATTCAACCTCCAGTGTGATGGTCTTC 28210336 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| || ||||| ||||| Sbjct 28210335 CCTGTCAACGTCTTAACGAAGATCTGCAT 28210307 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| ||||| || || ||| ||| | || || Sbjct 27893381 ACCAGGTGTAGGGTAGACTCCTTCTGGATGTTATAATCCGCCAGAGTGCGTCCATCCTCA 27893440 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 27893441 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 27893500 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | || ||||||| ||||| ||||| Sbjct 27893501 ATCTTCGCCTTCACGTTGTCGATGGTGTCTGAAGATTCAACCTCCAGTGTAATGGTCTTC 27893560 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||| |||||| |||||||| |||||| Sbjct 27893561 CCGGTCAAAGTCTTGACAAAGATCTGCATG 27893590 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| ||| || | || || || || || || || || Sbjct 28416227 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATCTTCGAGCTGCTTGCCAGCAAA 28416168 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 28416167 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATT 28416108 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| | ||| ||||| | ||| || |||||||| || || ||||| || Sbjct 28416107 GTCAATTGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 28416048 Query 45325 AAAGATTTGCATG 45337 |||||| |||||| Sbjct 28416047 AAAGATCTGCATG 28416035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075065180588