Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq3 105 6e-18 seq4 93.3 4e-14 seq2 86.0 6e-12 >seq1 Length=75119905 Score = 127 bits (140), Expect = 2e-24 Identities = 462/714 (65%), Gaps = 17/714 (2%) Strand=Plus/Minus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| | || || |||||||| ||||| || || || |||||| | | | | Sbjct 54133353 CACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTGCTCGAGAACCTCGCCTCCCGG 54133294 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| ||| | ||||| | ||| ||||| || || | ||||| Sbjct 54133293 TTCATGTCCGACGTGCAGGTGGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATC 54133234 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || ||||| || || || |||| || ||| | ||| || | Sbjct 54133233 GAGAACATCCACTCGGAGATGTACTCCCTGCTGCTCGAGACCTACATCCGCGACGCCGCC 54133174 Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAG 57926 ||||| | || ||| ||| |||| || | ||||| || | ||||| | Sbjct 54133173 GAGAAGGACCGCCTCTTCCGCGCCGTCGACACCGTCCCCGCCGTCCGCCGCAAGGCCGTC 54133114 Query 57927 TGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTC 57986 ||||| || ||||| || ||| | | | ||||||||| | || |||| ||| Sbjct 54133113 TGGTCCATGCGCTGGATCGAAGGCGGCGAGCGC---TTCGCCGAGCGCCTCGTCGCCTTC 54133057 Query 57987 GCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAA 58045 ||| |||||| || || ||||| |||||| ||| |||| || | || ||| | ||||| Sbjct 54133056 GCCTGCGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTCAAGAA 54132998 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 || || || ||||| || || || || ||||||| | || |||||||||||||| || Sbjct 54132997 GCGTGGTCTCATGCCGGGGCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGGCT 54132938 Query 58106 CCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGATC 58164 || || || || ||||| | ||| | | | | || | ||| | | | Sbjct 54132937 GCACTGCGACTTCGCCTGCCTCCTCTACGAACTCCTCAACGGCAAGCTCGA-GGAGTCCC 54132879 Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224 || || || || || |||| || || | ||||| | ||||| || ||| || | Sbjct 54132878 GCGTCCGCGAGATCGTCGCCGACGCCGTTGACATCGAGAGGGAGTTCATCTGCGACGCTC 54132819 Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284 | || ||| | |||| |||||| | | ||| ||||||| ||||| || | Sbjct 54132818 TGCCATGTGCCCTCGTCGGCATGAACGCCGGACTCATGGGCCAGTACATCGAGTTCGTCG 54132759 Query 58285 CCGACAGACTTTTGCTCGAACTGAT-TGGAGAGCGTCA----TTACAACACGAAAAATCC 58339 ||||| | | ||||| || | | ||| | || || |||||| | || || Sbjct 54132758 CCGACCGCC---TGCTC--ACGGCTCTGGGGTGCAGCAAGATGTACAACGCCGTCAACCC 54132704 Query 58340 GTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 ||| || | ||| | || |||||||| |||||||||| ||||| ||||| || Sbjct 54132703 GTTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAA 54132650 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| |||||||||| || || || | || || || |||| Sbjct 27894046 CATGCAAATCTTTGTCAAGACCTTGACAGGCAAGACCATTACTCTGGAGGTCGAGTCGTC 27893987 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || ||||||||| || | || || ||||| Sbjct 27893986 TGACACAATCGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTCCACCGGACCA 27893927 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| ||||| || |||||||||||| | || || || || ||||| || Sbjct 27893926 GCAGCGCCTAATCTTTGCTGGCAAACAGCTTGAGGATGGCCGCACCCTGGCAGATTACAA 27893867 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || |||||||| ||||| || ||||| ||| Sbjct 27893866 CATCCAGAAAGAATCCACTCTGCACCTGGTGCTT 27893833 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || |||||||| |||| ||||| || || ||| | || ||||| |||| Sbjct 28210078 CATGCAGATCTTTGTAAAGACCTTGACTGGCAAGACAATTACCCTGGAGGTTGAGTCGTC 28210137 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| || || ||||||||| ||| | || || ||||| Sbjct 28210138 CGACACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 28210197 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || | || | ||||| || Sbjct 28210198 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAA 28210257 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || ||||| ||||| |||||||| ||| Sbjct 28210258 TATCCAGAAGGAATCCACTCTGCATCTGGTGCTT 28210291 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || ||||| || |||||| |||| ||||| | || Sbjct 28416035 CATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 28416094 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| || || ||||||||| ||| | || || ||||| Sbjct 28416095 GGACACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 28416154 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| ||| | ||||| || || || || || Sbjct 28416155 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACCCTGGCTGACTACAA 28416214 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| ||||| || || || Sbjct 28416215 CATCCAGAAGGAGTCGACCCTTCACCTTGTCCT 28416247 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || |||||||| || ||||| | || ||||| | || Sbjct 28416263 CATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACGCTTGAAGTTGAGTCATC 28416322 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || || | || ||||||||||||| | || || ||||| Sbjct 28416323 TGACACTATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCA 28416382 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| ||||||||||| || ||| | || || || || || || || Sbjct 28416383 GCAGCGTCTCATATTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTACAA 28416442 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || ||||| ||||| || Sbjct 28416443 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCT 28416475 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || |||||| | || || || | || Sbjct 27894501 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 27894442 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| || ||| | ||||||||| ||| | || || ||||| Sbjct 27894441 GATACGATCGACAATGTCAAGGCAAAGA-TCCAGGACAAGGAGGGCATCCCCCCGGACCA 27894383 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| || || ||| |||| || || || ||||| || Sbjct 27894382 GCAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAGGATGGCCGCACCCTGGCAGATTACAA 27894323 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || |||||||| || || || ||||| || Sbjct 27894322 CATCCAGAAGGAGTCCACCCTCCATCTGGTGCTCAGGCTCAGGGGTGG 27894275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || || ||| || | || || | ||| Sbjct 27881264 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATTACCCTCTAGGTCGAGTCTTCC 27881205 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | ||||||||| ||| | || || ||||| Sbjct 27881204 GACACGATCGACAATGTCAAGTCAAAGA-TCCAGGACAAGGAGGGCCTCCCCCCGGACCA 27881146 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| |||| || ||| | ||||| || Sbjct 27881145 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGGCGCACTCTCGCGGATTACAA 27881086 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || ||| | || || || || || || ||| Sbjct 27881085 CATCCAGAAATAGTCCACCCTCCACCTTGTTCTT 27881052 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || |||||||| |||||| | || || || ||||| Sbjct 28209395 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGTCGTCC 28209454 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | ||||||||| ||| | || || ||||| Sbjct 28209455 GACACGATCGACAACGTCAAGGCAAAGA-TCCAGGACAAGGAGGGCATTCCTCCAGACCA 28209513 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || ||||| || ||| | || ||| || | ||| || || Sbjct 28209514 GCAGCGCCTCATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCCGACTACAA 28209573 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || || || || || ||||| || || || Sbjct 28209574 CATCCAGAAGGAGTCCACCCTCCACCTGGTCCTGAGGCT 28209612 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || ||||| || ||||| |||| || || |||| Sbjct 27894274 CATGCAAATCTTTGTGAAGACCCTTACTGGCAAGACCATCACACTCGAGGTCGAGTCGTC 27894215 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || || || ||| | ||||||||| ||| | || || |||| Sbjct 27894214 TGACACGATCGACAATGTGAAGGCAAAGA-TCCAGGACAAGGAGGGCATCCCCCCAGACC 27894156 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||| || || || |||||||| || |||||||| Sbjct 27894155 AGCAGCGCCTCATCTTTGCTGGCAAGCAACTGGAAGAC 27894118 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| || || || || || | || |||||| | || Sbjct 27893590 CATGCAGATCTTTGTCAAGACTTTGACCGGGAAGACCATTACACTGGAGGTTGAATCTTC 27893531 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || ||||||||| ||| | || || ||||| Sbjct 27893530 AGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 27893471 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 |||||| || || || ||||| || ||| | || || | | | ||| || ||||||| Sbjct 27893470 GCAGCGCCTGATCTTTGCTGGTAAGCAGCTTGAGGA-TGGACGCACTCTGGCGGATTATA 27893412 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || || || || ||||| || Sbjct 27893411 ACATCCAGAAGGAGTCTACCCTACACCTGGTGCT 27893378 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| | || || || | || Sbjct 28209622 CATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACGCTGGAGGTCGAGTCCTC 28209681 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || ||| ||||| ||| | || || ||||| Sbjct 28209682 TGACACGATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCA 28209741 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || || ||||| ||| | || ||| || | ||| || || Sbjct 28209742 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACCCTCGCCGACTACAA 28209801 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || ||||| || || |||||||| || || ||| | || || Sbjct 28209802 CATCCAGAAGGAATCCACACTCCATCTGGTGCTCAGGCTGCGTGGTGG 28209849 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || |||||||| || || || | || ||||| | || Sbjct 55138557 ATGCAGATATTTGTGAAGACCCTCACAGGCAAGACAATTACTCTTGAGGTTGAGTCATCT 55138498 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || || ||| || ||||| ||| | || || |||||| Sbjct 55138497 GACACTATCGATAACGTGAAGGCGAAAATCCAAGATAAGGAGGGCATTCCTCCAGACCAG 55138438 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | | || || || || |||||| Sbjct 55138437 CAGCGTCTTATCTTCGCCGGGAAGCAGCTCGCCGATGGGCGCACCTTGGCAGACTATAAC 55138378 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || || || || ||| | ||| | || || Sbjct 55138377 ATTCAGAAAGAGTCCACCCTGCACCTTGTCCTTCGTCTGCGTGGTGG 55138331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| | || ||||| | || Sbjct 28209850 CATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACTCTGGAGGTTGAGTCCTC 28209909 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || || || ||| | ||| ||||| ||| | || || |||| Sbjct 28209910 TGACACGATCGACAATGTGAAGGCAAAGA-TCCAGGATAAGGAGGGCATTCCCCCGGACC 28209968 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||||| || || ||||||||||| ||| | || || || || ||||| | Sbjct 28209969 AGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTACA 28210028 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 | || || || ||||| || | || ||||| ||| Sbjct 28210029 ATATCCAGAAGGAATCCACCTTGCACCTGGTGCTT 28210063 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || ||||| || ||||| |||| || || | || Sbjct 28415807 CATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTC 28415866 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || || || ||| | ||||||||| ||| | || || |||| Sbjct 28415867 TGACACCATCGACAACGTGAAGGCAAAGA-TCCAGGACAAGGAGGGCATCCCCCCGGACC 28415925 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | || || ||||||||||| ||| | || || || || || || | Sbjct 28415926 AGCAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACA 28415985 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 |||| ||||| || || || || || ||||| || || || Sbjct 28415986 ACATCCAAAAGGAGTCCACCCTCCACCTGGTGCTGAGGCT 28416025 >seq3 Length=59935730 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| ||||| || |||||| | || ||||| |||| Sbjct 2682380 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCT 2682321 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | | ||| | ||| ||||| ||| | || || ||||| Sbjct 2682320 GACACCATCGACAACGTTAAGGCCAAGA-TCCAGGATAAGGAGGGCATCCCACCGGACCA 2682262 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| |||| || | || | || || || Sbjct 2682261 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCTGACTACAA 2682202 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || || || || ||||| || || || | ||| | || |||| Sbjct 2682201 CATTCAGAAGGAGTCCACCCTTCACCTTGTGCTGCGTCTGCGTGGTGGTA 2682152 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||||||||| || |||||| | || ||||| |||| Sbjct 3234819 CATGCAGATCTTCGTGAAGACACTGACAGGCAAGACCATCACCCTTGAGGTTGAGTCGTC 3234760 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | || ||||||||| ||| | || || ||||| Sbjct 3234759 AGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 3234700 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || |||||||| ||| |||| || | || | || || || Sbjct 3234699 GCAGCGTTTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTTGCTGACTACAA 3234640 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| || || || | ||| | || |||| Sbjct 3234639 CATCCAGAAGGAGTCCACCCTTCACCTAGTGCTGCGTCTGCGTGGTGGTA 3234590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| || || ||||| || ||||| | || |||||| | || Sbjct 13692810 CATGCAGATTTTTGTGAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAATCTTC 13692869 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| | || | ||||| || ||| | | ||||||| ||| | || || |||| Sbjct 13692870 TGACACGATAGATAATGTCAAGGCAAAGATTCAAG-ACAAGGAGGGCATCCCCCCAGACC 13692928 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTAT 31369 ||||||| || || || ||||| || ||| | || || || | ||| || ||| Sbjct 13692929 AGCAGCGCCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGGCACAC-CTTAGCAGACTAT 13692987 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||||||||| || || || || || || ||| | ||| | || || Sbjct 13692988 AACATTCAAAAAGAGTCCACCCTGCACCTTGTCCTTCGTCTGCGAGGTGG 13693037 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || |||||| | || ||||| ||| Sbjct 3234590 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTTGAGAGCTCC 3234531 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || |||||| Sbjct 3234530 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3234471 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||||||||| ||| |||| || Sbjct 3234470 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGA 3234436 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||| |||| ||||| || |||||| | || || || | || Sbjct 3235046 ATGCAAATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCATCT 3234987 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| ||| | || || |||||| Sbjct 3234986 GACACCATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 3234927 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | ||||| | ||| | || || ||| Sbjct 3234926 CAGCGCCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCAGGACCCTTGCGGACTACAAC 3234867 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| || ||||| || Sbjct 3234866 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCT 3234835 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || || || | || ||||| ||| Sbjct 53307610 ATGCAGATCTTTGTTAAGACCCTCACTGGCAAGACTATTACTCTTGAGGTTGAGAGCTCC 53307551 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | ||| ||||||||||||| | || || |||||| Sbjct 53307550 GATACCATTGACAATGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 53307491 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 || | || ||||| || ||||| ||| | || || ||| || ||| ||||| || Sbjct 53307490 CAAAGACTCATATTTGCCGGCAAGCAGCTAGAGGATGGCCGGAC-ATTAGCTGATTACAA 53307432 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || |||||||| || || ||| | |||||||||| Sbjct 53307431 CATCCAGAAGGAGTCTACTCTTCACCTTGTTCTTCGTTTGAGGGGCGG 53307384 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| ||||| || |||||| | || || || | || Sbjct 2682152 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCATCT 2682093 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||| ||||| ||| | || || |||||| Sbjct 2682092 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAG 2682033 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| ||| ||||||| || | ||| || ||| Sbjct 2682032 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCGCCGACTACAAC 2681973 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || ||||| || || || | ||| | || |||| Sbjct 2681972 ATCCAGAAGGAGTCCACCCTTCACCTTGTCCTGCGTCTGCGTGGTGGTA 2681924 >seq4 Length=48772488 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||||||||| | || || || || ||||| || ||||| |||||||| |||||||| Sbjct 36296329 GGACAAGGAAGGGATTCCTCCGGATCAACAGCGGCTGATATTTGCTGGCAAGCAGTTGGA 36296388 Query 31345 AGACTCTATG-ACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTAC 31403 ||| | | | ||| | || || ||||| ||||| ||||| |||||||| |||| | Sbjct 36296389 AGA-TGGACGCACTCTTGCTGACTACAACATCCAAAAGGAATCAACTCTTCACTTGGTCC 36296447 Query 31404 TTAGACTGAGGGGCGGTA 31421 | || || ||||| |||| Sbjct 36296448 TCAGGCTCAGGGGTGGTA 36296465 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||||||||| |||||||| | || || || | Sbjct 34033300 AAGATGCAGATCTTCGTCAAGACCCTGACAGGCAAGACGATCACGCTGGAGGTGGAGTCC 34033359 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | | ||||||||| ||| | ||||| ||| Sbjct 34033360 TCGGACACGATCGACAACGTCAAGGCCAAGGTGCAGGACAAGGAGGGCATCCCGCCGGAC 34033419 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || |||| ||| || || ||| || Sbjct 34033420 CAGCAGCGGCTCATCTTCGC------GTAGCTGGAGGACGGCCGCACCCTGGCCGACTAC 34033473 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || || || || ||||| || | || ||||| || Sbjct 34033474 AACATCCAGAAGGAGTCCACGCTCCACCTGGTGCTCCGCCTCAGGGGAGG 34033523 >seq2 Length=59384932 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || || || || ||||| | || || || | Sbjct 10639458 AAGATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACGCTGGAGGTGGAGTCC 10639399 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || | || ||| ||||| ||| | || || ||| Sbjct 10639398 TCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCACCGGAC 10639339 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| |||| ||| || | ||| || Sbjct 10639338 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTAC 10639279 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || || || || ||||| || |||||||||| || Sbjct 10639278 AACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGACTGAGGGGAGG 10639229 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| ||||| || ||||| | || || || | Sbjct 34838007 AAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGTCC 34837948 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || | || ||||||||| ||| | ||||| ||| Sbjct 34837947 TCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 34837888 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | || ||| || | ||| || Sbjct 34837887 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTAC 34837828 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || ||||| || Sbjct 34837827 AACATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 34837793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766243981760