Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 3e-13 >seq1 Length=75119905 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || || || | || || ||||||||| | ||||||||||| || || |||||||||| Sbjct 26504421 CCACCCCTCAGCCTCAGCACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGCT 26504362 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || | | || ||||||||||||||| ||| |||| | |||||| |||| ||| Sbjct 26504361 AACGTTCGCCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCCGGGGGA 26504302 Query 33263 ATGCCTTCTTTTTC 33276 ||||| ||||| || Sbjct 26504301 ATGCCCTCTTTGTC 26504288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777491217144