Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=75119905 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| |||| || | | ||||| ||||||||| || || || ||||| || ||| Sbjct 26504433 TTAATCATAGTTCCACCCCTCAGCCTCAGCACCAAATGGAGCGTCGACTCTTTCTGAATG 26504374 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 |||||||| | | ||| |||||||||||| || || ||| |||| ||||| || Sbjct 26504373 TTGTAATCAGCTAACGTTCGCCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTTTGC 26504314 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| ||| | ||| |||||||| Sbjct 26504313 TGATCCGGGGGAATGCCCTCTTTGTC 26504288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419587056815868