Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq3 122 8e-23 seq2 104 2e-17 >seq1 Length=75119905 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | || || ||||| || | ||| || ||| | ||| | ||||| Sbjct 28209603 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCA 28209544 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| ||||| ||||||| | | ||||| ||||||||||| || || ||||| | Sbjct 28209543 AGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGG 28209484 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||||||||||| | ||| ||||| | ||||| |||| ||||||||||| Sbjct 28209483 ATCTTTGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTTTTG 28209424 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || ||||||||||||||||| Sbjct 28209423 CCAGTGAGGGTCTTCACAAAGATCTGCAT 28209395 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854 || ||||| ||| | || || |||||||| | ||| || || || ||| | ||| Sbjct 28416020 CAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCATC 28415961 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 ||| ||||| || || | ||||| | || ||||| || || || || || || ||||| Sbjct 28415960 CTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 28415901 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || |||||||| ||| | ||| ||||||| ||||| || | ||||||||| Sbjct 28415900 CTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGCGTGATGGT 28415841 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || |||||||||||||||| Sbjct 28415840 CTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGC 28415806 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | || || ||||| || | ||| || || || ||| | |||||| Sbjct 28415789 CACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTC 28415730 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | || ||||| || || || || || || ||||| | Sbjct 28415729 AAGCTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 28415670 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||||| | ||||| || | ||||||||| || Sbjct 28415669 GATCTTGGCCTTCACGTTGTCGATTGTGTCAGAGGACTCGACCTCGAGCGTGATGGTCTT 28415610 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || |||||||||||||||| Sbjct 28415609 GCCGGTGAGGGTCTTGACAAAGATCTGCATGC 28415578 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| || | || || ||||| || | ||| ||||| || ||| | |||||| Sbjct 27894292 CACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTC 27894351 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| | ||||| | | ||||| || || || || || || ||||| | Sbjct 27894352 CAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27894411 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || ||||||||||| | ||| || |||| ||||| |||| |||||||| || Sbjct 27894412 GATCTTTGCCTTGACATTGTCGATCGTATCAGAAGACTCGACCTCAAGGGTGATGGTCTT 27894471 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 27894472 GCCGGTGAGGGTCTTCACAAAGATCTGCAT 27894501 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | ||||| ||||| || | ||||||||| || |||| |||||| Sbjct 27893380 CACCAGGTGTAGGGTAGACTCCTTCTGGATGTTATAATCCGCCAGAGTGCGTCCATCCTC 27893439 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || ||||||| | | ||||| ||||| || || || || ||||| | Sbjct 27893440 AAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 27893499 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | || || || | || ||||| || Sbjct 27893500 GATCTTCGCCTTCACGTTGTCGATGGTGTCTGAAGATTCAACCTCCAGTGTAATGGTCTT 27893559 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || | ||| || |||||||||||||||| Sbjct 27893560 CCCGGTCAAAGTCTTGACAAAGATCTGCATGC 27893591 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||| | |||||| || || ||||| || | || ||||| || ||| || || Sbjct 27894064 CACAAGGTGCAAGGTGGACTCCTTCTGGATATTGTAATCTGCCAGGGTGCGACCGTCTTC 27894123 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||| || || || ||||||| | | ||||| ||||| || || || || ||||| | Sbjct 27894124 CAGTTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 27894183 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || |||||||| || | ||| ||||||| ||||| || | |||||||| || Sbjct 27894184 GATCTTTGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGTGTGATGGTCTT 27894243 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||||||| || ||||||||||| ||||||| Sbjct 27894244 GCCAGTAAGGGTCTTCACAAAGATTTGCATGC 27894275 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| |||||| || |||||||| || | || ||||| || ||| | |||||| Sbjct 28210060 CACCAGGTGCAAGGTGGATTCCTTCTGGATATTGTAATCTGCCAGGGTGCGGCCATCCTC 28210001 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | | ||||| || || ||||| || || || || | Sbjct 28210000 AAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTG 28209941 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || |||||||| || | ||| ||||||| | || || || | |||||||| || Sbjct 28209940 GATCTTTGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTT 28209881 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || ||||||||||||| Sbjct 28209880 GCCGGTTAGGGTCTTGACGAAGATCTGCATGC 28209849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || ||||| || | ||| || || || ||| | |||||| Sbjct 28415561 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTC 28415502 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 28415501 GAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 28415442 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | | ||||| || | ||||||||| || Sbjct 28415441 GATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTT 28415382 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 28415381 GCCGGTGAGGGTCTTCACAAAGATCTGCAT 28415352 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || ||||| || | ||| || || || ||| | |||||| Sbjct 28416473 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTC 28416414 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | || || | | ||||| ||||| || || ||||| ||||| | Sbjct 28416413 AAGCTGCTTACCAGCGAATATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 28416354 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| || | | | |||||||| || || |||| ||||||||| || Sbjct 28416353 GATCTTGGCCTTCACATTGTCAATAGTGTCAGATGACTCAACTTCAAGCGTGATGGTCTT 28416294 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || ||||| ||||||||||||| Sbjct 28416293 GCCTGTGAGGGTCTTCACGAAGATCTGCATGC 28416262 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| ||||||| | | ||||| || || || || || || || Sbjct 28209777 TCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTA 28209718 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || | ||| ||||||| | ||||| || | ||||||| Sbjct 28209717 TCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATG 28209658 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || ||||| || || || ||||||||||||| Sbjct 28209657 GTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCATGC 28209621 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||||| || |||||||| || | || ||||| | ||| | |||||| Sbjct 27893608 CACCAGGTGCAGGGTGGATTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCCTC 27893667 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || ||| | ||||| | | ||||| || || ||||| || || ||||| | Sbjct 27893668 AAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTG 27893727 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| || ||| ||||||| ||||| || | ||||| || || Sbjct 27893728 GATCTTCGCCTTCACATTATCGATTGTGTCAGACGACTCGACCTCCAGTGTGATTGTCTT 27893787 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || | || || |||||||||||||||| Sbjct 27893788 CCCTGTCAAGGTCTTGACAAAGATCTGCATGC 27893819 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||||| || || ||||| || | ||| ||||| | ||| | |||||| Sbjct 28210516 CACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGGCCATCCTC 28210457 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || ||||||| | | ||||| ||||| || || || || ||||| | Sbjct 28210456 AAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 28210397 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || |||||||| ||| | | | ||||| | || || || | |||||||| || Sbjct 28210396 GATCTTTGCCTTCACGTTGTCAATGGTGTCCGAAGATTCAACCTCCAGTGTGATGGTCTT 28210337 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || || ||||||||||| Sbjct 28210336 CCCTGTCAACGTCTTAACGAAGATCTGCAT 28210307 >seq3 Length=59935730 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTC 94868 ||| || |||||||| | ||| ||||| ||| | || |||||||||||| |||| Sbjct 53306957 AGTGGACTCCTTTTGGATGTTGTAATCTGCTAAG-GTACGCCCATCCTCCAGCTGCTTTC 53307015 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || ||||||| | || |||||||| |||||||| || || ||||| | ||| || |||| Sbjct 53307016 CGGCAAAGATGAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGAATCTTGGCCT 53307075 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | ||| | | ||||||| | || || |||| ||||||||| |||||||| | | Sbjct 53307076 TCACGTTATCAATGGTGTCAGAGCTCTCCACCTCAAGCGTGATGGTCTTTCCAGTCAATG 53307135 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || |||||||| ||||| Sbjct 53307136 TCTTGACAAAGATTTGCAT 53307154 Score = 122 bits (134), Expect = 8e-23 Identities = 170/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || || ||||| || | || | ||| | |||||| ||||| || | ||| | Sbjct 53307376 TTTGCATCCCGCCCCTCAAACGAAGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGT 53307435 Query 94833 AATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891 |||| ||| || || | |||||| ||||| || ||| |||| || | ||||||||| Sbjct 53307436 AATCAGCTAAT-GTCCGGCCATCCTCTAGCTGCTTGCCGGCAAATATGAGTCTTTGCTGG 53307494 Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951 ||||||||||| ||||| ||||| | ||||| ||||| || | | | || || | | Sbjct 53307495 TCTGGAGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCGGAG 53307554 Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || |||| || || || || ||||| || || || |||||||||||||| Sbjct 53307555 CTCTCAACCTCAAGAGTAATAGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 53307610 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839 || |||| || || | || | ||||| || || || ||||| | |||||| || ||| Sbjct 13693037 CCACCTCGCAGACGAAGGACAAGGTGCAGGGTGGACTCTTTTTGAATGTTATAGTCTGCT 13692978 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 | |||| |||||| ||||| || || ||||||| | | ||||| ||||| || Sbjct 13692977 AAG-GTGTGCCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 13692919 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 || || || ||||| | ||| ||||||||||| | | ||||||| || || Sbjct 13692918 GATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATTATCTATCGTGTCAGAAGATTCAAC 13692859 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || |||||||| || |||||||| |||||||||| Sbjct 13692858 CTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCATGC 13692809 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || ||||| || | ||| || || | ||| | |||||| Sbjct 2681487 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 2681546 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| ||||| ||||||| | | ||||| || || ||||| || || ||||| | Sbjct 2681547 CAGCTGCTTTCCTGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 2681606 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | | ||||||| || || |||| |||||||| || Sbjct 2681607 GATCTTGGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTT 2681666 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| ||||||||||||||||| Sbjct 2681667 GCCAGTCAAAGTCTTCACAAAGATCTGCAT 2681696 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || ||||| || | ||| || || | ||| | |||||| Sbjct 3233925 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTC 3233984 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || ||||| || || ||||| | Sbjct 3233985 CAGCTGCTTCCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 3234044 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||||| | ||||| || | |||||||| || Sbjct 3234045 GATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAAGGTGATGGTCTT 3234104 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || |||||||||||||||| Sbjct 3234105 GCCGGTGAGGGTCTTGACAAAGATCTGCATGC 3234136 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| || || ||||||| | | ||||| || || ||||| || || || Sbjct 3234207 ATCCTCCAGCTGCTTCCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 3234266 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| ||| | ||| ||||| | | ||||| || | ||||| Sbjct 3234267 GTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGAT 3234326 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || || || || || || |||||||||||||||| Sbjct 3234327 GGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGC 3234364 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||||| || || ||||| || | ||| ||||| || ||| ||||| ||||| Sbjct 13693470 GTGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGCCCGTCCTCAAGCTG 13693411 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || |||| || | | ||||| || || || || || || ||||| | ||| || Sbjct 13693410 CTTCCCAGCAAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTT 13693351 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||||||| | ||| ||||| | || || || | |||||||| || ||||| Sbjct 13693350 CGCCTTGACGTTGTCGATTGTGTCCGAAGACTCAACCTCCAAAGTGATGGTCTTACCAGT 13693291 Query 94984 AAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || || |||||||||||||||| Sbjct 13693290 AAGCGTCTTGACAAAGATCTGCATGC 13693265 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| || | ||| | || || ||||| || | ||| || ||| | ||| | | Sbjct 2681938 CGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCA 2681997 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || ||||||| | | ||||| || || ||||| || || || Sbjct 2681998 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTA 2682057 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | | ||||||| || || |||| |||||| Sbjct 2682058 TCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCAAGGGTGATG 2682117 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | ||| ||||||||||||||||| Sbjct 2682118 GTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 2682152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| ||||| | ||||| | | ||||| || || ||||| || || || Sbjct 2681769 ATCCTCCAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 2681828 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| ||| | ||| ||||||| | || || || | ||||| Sbjct 2681829 GTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAGGGTGAT 2681888 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || || || ||||||||||| Sbjct 2681889 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2681924 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| || || | ||||| | | ||||| || || || || || || || Sbjct 2682225 ATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTT 2682284 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| ||| | ||| ||||||| || || |||| ||||| Sbjct 2682285 ATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGAT 2682344 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| | ||| ||||||||||||||||| Sbjct 2682345 GGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 2682380 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| ||| | ||| | || || ||||| || | ||| || || || || || || Sbjct 3234604 CGCAGCACTAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG-CA-AGGGTGCGAC 3234661 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||||||||| || || ||||||| || | ||||| || || || || || || | Sbjct 3234662 CATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGGGGGATGCCCTCCT 3234721 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || |||||||| | | | ||||| | || || |||| |||| Sbjct 3234722 TGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGA 3234781 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| || || || || || ||||| ||||||||||||| Sbjct 3234782 TGGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCATGC 3234820 Score = 86.0 bits (94), Expect = 6e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| |||| || ||| | ||||| | | ||||| || |||||||| || || || Sbjct 13692738 ATCCTCAAGCTACTTCCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTT 13692679 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | |||||||||||| || ||| ||||||| ||||| |||| || || Sbjct 13692678 ATCTTGAATTTTTGCCTTCACATTATCGATCGTGTCAGATGACTCGACCTCAAGGGTAAT 13692619 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACAACA 95017 || || ||||| || || |||||||| |||||||| || | |||| Sbjct 13692618 TGTCTTGCCAGTGAG-GTCTTCACAAAAATCTGCAT-CTGAAAACA 13692575 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| || || | ||||| | | ||||| || || ||||| || || || Sbjct 3234435 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 3234494 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| ||| | ||| ||||| | | || || || | ||||| Sbjct 3234495 GTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGAT 3234554 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || || |||||||||||||| Sbjct 3234555 GGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 3234590 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGGAATCCT 94856 |||| ||||| ||| || ||||| || | ||| || || | || || || || ||| | Sbjct 3234838 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTC-CGCA-AGGGTCCTGCCATCTT 3234895 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || | ||||| | | ||||| || || || || || || || || | Sbjct 3234896 CAAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTATCCT 3234955 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||||| || | ||| ||||||| || || |||| |||||||| | Sbjct 3234956 GGATCTTGGCCTTCACATTGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCT 3235015 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| | ||| ||||||||||| ||||| Sbjct 3235016 TGCCAGTCAAAGTCTTCACAAAGATTTGCAT 3235046 >seq2 Length=59384932 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| |||| ||| | ||||| ||||| || || ||||| || | ||| || ||| Sbjct 10639229 CCTCCCCTCAGTCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10639288 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||||||||||| || ||| | ||||| | | ||||| || || || Sbjct 10639289 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 10639348 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | || || ||||| ||| | ||| ||||| | | || || Sbjct 10639349 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 10639408 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||||| || || || || || ||||| ||||||||||| Sbjct 10639409 TCCAGCGTGATGGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 10639455 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || ||||| || | ||| || ||| | ||| | ||||| Sbjct 34837795 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 34837854 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || ||| | ||||| | | ||||| || || || || || || ||||| | Sbjct 34837855 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 34837914 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | | || || || | ||||||||| || Sbjct 34837915 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTT 34837974 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012 || || || || ||||| ||||||||||| |||| Sbjct 34837975 GCCCGTCAGGGTCTTCACGAAGATCTGCAT-CTTA 34838008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291043098080