Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq28 549 6e-152 seq4 540 3e-149 seq5 513 4e-141 seq1 453 3e-123 seq3 250 7e-62 >seq28 Length=135199 Score = 549 bits (608), Expect = 6e-152 Identities = 711/977 (73%), Gaps = 4/977 (0%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 1099 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 1040 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| |||||||| || || |||||| Sbjct 1039 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 980 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || ||||| ||||| || || ||| | || |||||||||||||| ||| Sbjct 979 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 920 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || ||||| ||| |||||||||| || || |||||||| Sbjct 919 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCT 860 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | | | ||||| ||||||||||| || ||||| ||| | || |||| | |||||| Sbjct 859 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 800 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| || ||| | |||||||||| || | | || || ||| Sbjct 799 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATG 740 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 | || ||||| || |||||| |||| || | |||| || |||||| ||||| Sbjct 739 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTT 681 Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | ||||||| |||| ||||| || || ||||||||||||| | || || |||||||| Sbjct 680 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 621 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| || || ||||| |||||||||||||| || ||||| Sbjct 620 TTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTTCACAT 561 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| || ||||| || || || ||| ||||||||| || ||||| Sbjct 560 GTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 501 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| ||| ||| || | || || || || Sbjct 500 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 441 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 || ||||| |||||||| ||||||||||| ||||| || || || ||||| |||| || Sbjct 440 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 381 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077 || ||||||||| |||||| || |||||||||||||| ||||| | ||| ||| || Sbjct 380 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 321 Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137 || || || || ||| | || | | || || | |||||||| |||||||| ||||| Sbjct 320 TGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGG 261 Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTG 20196 || || || ||||| || ||||||||| ||||| || | || || ||||||| Sbjct 260 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGCGTTATTAATACTTGGGCTG 202 Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256 || | | || | ||||| || || | ||||| |||||||| || |||||||| |||| Sbjct 201 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 142 Query 20257 TCCCACTTGATTTAGCT 20273 |||| || ||| ||||| Sbjct 141 TCCCTCTAGATCTAGCT 125 >seq4 Length=48772488 Score = 540 bits (598), Expect = 3e-149 Identities = 709/977 (73%), Gaps = 4/977 (0%) Strand=Plus/Plus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 22675659 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 22675718 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| |||||||| || || |||||| Sbjct 22675719 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 22675778 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || ||||| |||| || || ||| | || |||||||||||||| ||| Sbjct 22675779 ATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 22675838 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || ||||| ||| ||||||| || || || |||||||| Sbjct 22675839 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTTGGGAAGCT 22675898 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | | | ||||| ||||||||||| || ||||| ||| | || |||| | |||||| Sbjct 22675899 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 22675958 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| || ||| | |||||||||| || | | || || ||| Sbjct 22675959 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATG 22676018 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 | || ||||| || |||||| |||| || | |||| || |||||| ||||| Sbjct 22676019 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTT 22676077 Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | ||||||| |||| ||||| || || ||||||||||||| | || || |||||||| Sbjct 22676078 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 22676137 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 22676138 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 22676197 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| || || || || || || ||| ||||||||| || ||||| Sbjct 22676198 GTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 22676257 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| ||| ||| || | || || || || Sbjct 22676258 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 22676317 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 || ||||| |||||||| ||||||||||| ||||| || || || ||||| |||| || Sbjct 22676318 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 22676377 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077 || ||||||||| |||||| || |||||||||||||| ||||| | ||| ||| || Sbjct 22676378 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 22676437 Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137 || || || || ||| | || | | || || | |||||||| |||||||| ||||| Sbjct 22676438 TGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGG 22676497 Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTG 20196 || || || ||||| || ||||||||| ||||| || | || || ||||||| Sbjct 22676498 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGCGTTATTAATACTTGGGCTG 22676556 Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256 || | | || | ||||| || || | ||||| |||||||| || |||||||| |||| Sbjct 22676557 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 22676616 Query 20257 TCCCACTTGATTTAGCT 20273 |||| || ||| ||||| Sbjct 22676617 TCCCTCTAGATCTAGCT 22676633 Score = 95.1 bits (104), Expect = 3e-15 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 19941 AACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGG 20000 ||| | || || || || || ||||| |||||||| ||||||||||| ||||| || Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 20001 TACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTC 20060 || ||||| |||| || || ||||||||| |||||| | |||| ||||||||| || Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTT- 45407060 Query 20061 TTTCTTG 20067 ||||||| Sbjct 45407059 TTTCTTG 45407053 >seq5 Length=28563423 Score = 513 bits (568), Expect = 4e-141 Identities = 706/978 (72%), Gaps = 7/978 (1%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | | ||||| || || | ||||| ||| Sbjct 14559539 TGGATAACTAGCACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCCCT 14559480 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| |||||||| || || |||||| Sbjct 14559479 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 14559420 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || ||||| ||||| || || ||| | || |||||||||||||| ||| Sbjct 14559419 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 14559360 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || ||||| ||| |||||||||| || || || ||||| Sbjct 14559359 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGAGAAGCT 14559300 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | | | ||||| || |||||||| || ||||| ||| | || |||| | |||||| Sbjct 14559299 GCATCCGTTGATGAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 14559240 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| || ||| | |||||||||| || | | || || ||| Sbjct 14559239 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG-TTTGGTATG 14559181 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 || ||||| | || |||||| |||| || | |||| || |||||| ||||| Sbjct 14559180 CACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTT 14559122 Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | ||||||| |||| ||||| || || ||||||||||||| | || || |||||||| Sbjct 14559121 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 14559062 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| ||||| ||||| |||||||||||| | || ||||| Sbjct 14559061 TTTAAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCAT-CATTTCACAT 14559003 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| || ||||| || || || ||| ||||||||| || ||||| Sbjct 14559002 GTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 14558943 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| ||| ||| || | || || || || Sbjct 14558942 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 14558883 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 || ||||| |||||||| ||||||||||| || || || || || ||||| |||| || Sbjct 14558882 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAAT 14558823 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTC-GTTCTTTACATTTCTTTCTTGCTACTTTCC 20076 || ||||||||| |||||| || |||| |||||||||| ||||| | ||| ||| | Sbjct 14558822 CTTCCAATATGCTAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGC 14558763 Query 20077 CCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATG 20136 | || || || || ||| | || | | || || | ||||||| |||||||| |||| Sbjct 14558762 CTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATG 14558703 Query 20137 GTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCT 20195 | || || || ||||| || ||||||||| ||||| || | || || |||||| Sbjct 14558702 GATTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGTGTTATTAATACTTGGGCT 14558644 Query 20196 GATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAAC 20255 ||| | | || | ||||| || || | ||||| |||||||| || |||||||| ||| Sbjct 14558643 GATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAAC 14558584 Query 20256 TTCCCACTTGATTTAGCT 20273 ||||| || ||| ||||| Sbjct 14558583 TTCCCTCTAGATCTAGCT 14558566 >seq1 Length=75119905 Score = 453 bits (502), Expect = 3e-123 Identities = 565/770 (73%), Gaps = 3/770 (0%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 3929689 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 3929630 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| | ||||| ||||||| |||||||| || || |||||| Sbjct 3929629 ACCTTATTGACCGCAACTTTTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 3929570 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || ||||| ||||| || || ||| | || |||||||||||||| ||| Sbjct 3929569 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 3929510 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || ||||| ||| |||||||||| || || |||||||| Sbjct 3929509 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCT 3929450 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | | | ||||| ||||||||||| || ||||| ||| | || |||| | |||||| Sbjct 3929449 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 3929390 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| || ||| | |||||||||| || | | || || ||| Sbjct 3929389 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATG 3929330 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 | || ||||| || |||||| |||| || | |||| || |||||| ||||| Sbjct 3929329 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTT 3929271 Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | ||||||| |||| ||||| || || ||||||||||||| | || || |||||||| Sbjct 3929270 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 3929211 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 3929210 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 3929151 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| || ||||| || || || ||| ||||||||| || ||||| Sbjct 3929150 GTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 3929091 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| ||| ||| || | || || || || Sbjct 3929090 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 3929031 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 || ||||| |||||||| ||||||||||| ||||| || || || ||||| |||| || Sbjct 3929030 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 3928971 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTG 20067 || ||||||||| |||||| || |||||||||||||| ||| |||||| Sbjct 3928970 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC-TTCTTG 3928922 >seq3 Length=59935730 Score = 250 bits (276), Expect = 7e-62 Identities = 322/442 (73%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 19833 CACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGT 19892 |||||| | ||||| ||||| || ||||| || || || ||| ||||||||| || Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 19893 TTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTAT 19952 ||||| || || | |||| |||||| ||||| ||| ||| || | || || Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 19953 AAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGA 20012 || || || ||||| |||||||| ||||||||||| ||||| || || || ||||| || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 20013 TTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACT 20072 || || || ||||||||| |||||| || |||||||||||||| ||||| | ||| || Sbjct 16821877 TTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCT 16821936 Query 20073 TTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTT 20132 | || || || || || ||| | || | | || || | |||||||| |||||||| Sbjct 16821937 TGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTA 16821996 Query 20133 AATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATG 20191 ||||| || || || ||||| || ||||||||| ||||| || | || || || Sbjct 16821997 AATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGCGTTATTAATACTTG 16822055 Query 20192 GGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCA 20251 ||||||| | | || | ||||| || || | ||||| |||||||| || |||||||| Sbjct 16822056 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 16822115 Query 20252 TAACTTCCCACTTGATTTAGCT 20273 |||||||| || ||| ||||| Sbjct 16822116 CAACTTCCCTCTAGATCTAGCT 16822137 Score = 107 bits (118), Expect = 6e-19 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || | ||||| | || |||||||| || | ||||| ||| Sbjct 15391372 TGGATAACTAGCACTGAAAATCATCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 15391313 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| |||||||| || || |||||| Sbjct 15391312 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTAATCGCAGCCCCTCCAGTAGAT 15391253 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATT 19472 || ||||| || || ||||| ||||| || || ||| | || |||||||||||| Sbjct 15391252 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATT 15391199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144441551973168