Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=75119905 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 || ||||| ||| | ||| ||||||||||| || |||| ||| || || ||||| ||| Sbjct 26504288 GACAAAGAGGGCATTCCCCCGGATCAGCAAAGGCTAATTTTTGCTGGAAAGCAATTGGAA 26504347 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| ||| | || ||||| |||||||| |||||||| || | ||| ||||| || Sbjct 26504348 GATGGGCGAACGTTAGCTGATTACAACATTCAGAAAGAGTCGACGCTCCATTTGGTGCTG 26504407 Query 115499 AGATTGCGAGGAGGAA 115514 || || | || |||| Sbjct 26504408 AGGCTGAGGGGTGGAA 26504423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343854851360