Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 seq2 118 9e-22 seq3 107 2e-18 seq4 102 7e-17 >seq1 Length=75119905 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||||||| |||| || || ||||||||||| || |||||||||||||| Sbjct 28209621 CCACCACGGAGCCTCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 28209562 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || ||| | || || ||||| ||||| ||| Sbjct 28209561 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGAGGA 28209502 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || ||||| ||| || | | | | |||||| | ||| Sbjct 28209501 ATGCCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTGTCGATCGTGTCGGACGACTCGA 28209444 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||||||| || || || || || ||||| |||||||| Sbjct 28209443 CCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 28209395 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||||||| |||| || || |||||||||||||| ||||||||||| ||| Sbjct 28416034 CCACCACGGAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCC 28415975 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || |||| ||| |||||| || Sbjct 28415974 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 28415915 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || ||||| |||||| | | | | ||||| | ||| Sbjct 28415914 ATGCCCTCCTTGTCCTGGATCTTTGC--CTTCACGTTGTCGATGGTGTCAGAAGACTCGA 28415857 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || |||||||| |||||||| Sbjct 28415856 CCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 28415808 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| ||| || ||||| ||||| || |||||||||||||| Sbjct 28209849 CCACCACGCAGCCTGAGCACCAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCG 28209790 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| ||| | || || ||||| |||||| || Sbjct 28209789 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 28209730 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| || || || | | |||||| | | | | ||||| || ||| Sbjct 28209729 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCAGAGGACTCGACC 28209670 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || ||||| || || ||||| || |||||||| Sbjct 28209669 TCCAGCGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 28209623 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||||||||| || ||||||||||| ||| Sbjct 28415578 CCACCACGCAGCCTGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCC 28415519 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || |||||||| | ||||| ||||| |||||| || Sbjct 28415518 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 28415459 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 28415458 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATCGTGTCCGAGGACTCGA 28415401 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || || ||||| |||||||| Sbjct 28415400 CCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 28415352 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||||||||| || ||||||||||| ||| Sbjct 28415806 CCACCACGCAGCCTGAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCC 28415747 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || |||||||| | || || ||||| |||||| || Sbjct 28415746 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 28415687 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 28415686 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATTGTGTCAGAGGACTCGA 28415629 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || |||||||| |||||||| Sbjct 28415628 CCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 28415580 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| ||| || ||||||||||| || |||||||| || |||| ||| | Sbjct 27894284 AGCCTGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGG 27894343 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | ||||||| || || || || | || || ||||| |||||| || | |||||| Sbjct 27894344 CCATCCTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 27894403 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || ||||| ||| || | | | | || || | ||| || | || Sbjct 27894404 TTGTCCTGGATCTTTGC--CTTGACATTGTCGATCGTATCAGAAGACTCGACCTCAAGGG 27894461 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || ||||| || || || ||||| |||||||| Sbjct 27894462 TGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 27894501 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| ||||| ||||||||||| || |||||||| || || Sbjct 28210534 CCCACCACGGAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCTGC 28210475 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | || || || ||| | || || ||||| ||||| || Sbjct 28210474 AAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 28210415 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || ||||| |||||| | | | | ||||| | || Sbjct 28210414 GATGCCCTCCTTGTCCTGGATCTTTGC--CTTCACGTTGTCAATGGTGTCCGAAGATTCA 28210357 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||| || || |||| ||| || || || ||||||||| Sbjct 28210356 ACCTCCAGTGTGATGGTCTTCCCTGTCAACGTCTTAACGAAGATCTGCATT 28210306 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| |||| ||| | | || || | || Sbjct 28416238 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATCTTCGAGCTGC 28416179 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| |||||| || | |||||| ||||| || | | Sbjct 28416178 TTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 28416119 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | ||| || | ||||||||| || || || Sbjct 28416118 GCCTTGACATTGTCAATTGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTG 28416059 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 28416058 AGGGTCTTGACAAAGATCTGCAT 28416036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 67667815 CCTCCACGGAGCCTGAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 67667756 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 | ||| | |||||||||| || || || || | || |||||||| |||||| Sbjct 67667755 AGGGTGCGGCCGTCCTCCAACTGCTTACCGGCGAAGATCAGCCGCTGCTGGTCC 67667702 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 |||||||| |||| ||| ||||| ||||| || || |||||||| || || | ||| Sbjct 26504412 AGCCTCAGCACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGCTAACGTTCGC 26504353 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | || |||||||| || || ||| |||| |||| || || ||| || | ||||||| Sbjct 26504352 CCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCCGGGGGAATGCCCTCT 26504293 Query 16838 TTGTC 16842 ||||| Sbjct 26504292 TTGTC 26504288 >seq2 Length=59384932 Score = 118 bits (130), Expect = 9e-22 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||||||||||||||| || |||||||||||||| | ||| | ||||| Sbjct 10639244 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 10639303 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| || | || |||||||| |||||| || | |||||| || || Sbjct 10639304 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCC 10639363 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| |||| ||||||| Sbjct 10639364 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGG 10639421 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || || || || || || || |||||||| ||| Sbjct 10639422 TCTTACCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 10639459 Score = 107 bits (118), Expect = 2e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||||| | ||| | ||||| Sbjct 34837793 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 34837852 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 34837853 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 34837912 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| |||| ||||||| Sbjct 34837913 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGG 34837970 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || ||||| || || || || |||||||| || Sbjct 34837971 TCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 34838007 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | |||||| | || |||||||||||||| || ||||||||||||||| Sbjct 10671869 CCGCCACGGAGGCGCAGTACTAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 10671810 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 | ||| | | ||||||| || || |||||| | || || ||||| |||||| Sbjct 10671809 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCC 10671756 >seq3 Length=59935730 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| | | ||||||| || Sbjct 3234160 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTGC 3234219 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | || || ||||| |||||| || | |||||| ||||| || || Sbjct 3234220 TTCCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 3234279 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | |||||| | ||| |||| ||||||||| || |||| Sbjct 3234280 GC--CTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGG 3234337 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| |||||||| Sbjct 3234338 TGAGGGTCTTGACAAAGATCTGCAT 3234362 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| | | ||||||| || Sbjct 3234388 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTGC 3234447 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| |||||| || | |||||| ||||| || || Sbjct 3234448 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 3234507 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | |||||| | ||| |||| ||||||||| || |||| Sbjct 3234508 GC--CTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCGG 3234565 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| |||||||| Sbjct 3234566 TGAGGGTCTTGACAAAGATCTGCAT 3234590 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| || || ||||||||||| || ||||||||||| || Sbjct 2681470 CCACCTCGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 2681529 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| || || || ||| | || || ||||| |||||| || Sbjct 2681530 AGGGTGCGGCCATCCTCCAGCTGCTTTCCTGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 2681589 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| | |||| Sbjct 2681590 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGATGACTCCA 2681647 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || |||| || || ||||| |||||||| Sbjct 2681648 CCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 2681696 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| || | ||| | | ||| Sbjct 3233923 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCC 3233982 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || || | || || ||||| |||||| || | |||||| ||||| Sbjct 3233983 TCCAGCTGCTTCCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 3234042 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| |||| |||||||| Sbjct 3234043 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAAGGTGATGG 3234100 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || |||||||| |||||||| Sbjct 3234101 TCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 3234134 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| ||||||||||| || |||||||| || |||| ||| ||||||| | || Sbjct 13693469 TGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGCCCGTCCTCAAGCTGC 13693410 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| |||| || ||||| ||||| || | |||||| ||||| ||| | | Sbjct 13693409 TTCCCAGCAAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTTC 13693350 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | ||| |||| |||||||| || || || Sbjct 13693349 GCCTTGACGTTGTCGATTGTGTCCGAAGACTCAACCTCCAAAGTGATGGTCTTACCAGTA 13693290 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||| |||||||| Sbjct 13693289 AGCGTCTTGACAAAGATCTGCAT 13693267 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || ||||||||||| || ||||||||||| || Sbjct 2681698 CCACCACGCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 2681757 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| || || || || | || || ||||| |||||| || Sbjct 2681758 AGGGTGCGACCATCCTCCAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGA 2681817 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| | |||| Sbjct 2681818 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAGCTCTCCA 2681875 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || ||||| || || ||||| || |||||||| Sbjct 2681876 CCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2681924 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || ||||||||||| || |||||||||||||| Sbjct 2681926 CCACCACGCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 2681985 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| || ||||| ||| | || || ||||| |||||| || Sbjct 2681986 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 2682045 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || || |||||| | | | | ||||| | |||| Sbjct 2682046 ATGCCCTCCTTATCCTGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGATGACTCCA 2682103 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || |||| || || ||||| |||||||| Sbjct 2682104 CCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 2682152 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||||| ||||||||||| || ||||||||||| || Sbjct 3234820 CCTCCCCGAAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCA 3234879 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | || ||||| || | ||||| ||||| ||||| || Sbjct 3234880 AGGGTCCTGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGGTCAGGGGGG 3234939 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || || |||||| | | | | ||||| | |||| Sbjct 3234940 ATGCCCTCCTTATCCTGGATCTTGGC--CTTCACATTGTCGATGGTGTCAGATGACTCCA 3234997 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || |||| || || ||||| || ||||| Sbjct 3234998 CCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATTTGCAT 3235046 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | ||| || |||||||||||||| |||||||| || || Sbjct 53306928 CCACCACGAAGGCGCAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCTGCT 53306987 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| || || || ||| | || |||| ||| || ||| ||| Sbjct 53306988 AAGGTACGCCCATCCTCCAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGATCCGGAGGA 53307047 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | |||||| | | | ||||| | |||| Sbjct 53307048 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTATCAATGGTGTCAGAGCTCTCCACC 53307107 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||| ||||| |||| || |||||||| || |||||| Sbjct 53307108 TCAAGCGTGATGGTCTTTCCAGTCAATGTCTTGACAAAGATTTGCATT 53307155 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||| || || | || || ||||||||||| || | ||||||||||||| Sbjct 31827566 CCGCCGCGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGACGTTGTAGTCGGCC 31827625 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||||| || || || || | || |||||||| || ||| || Sbjct 31827626 AGCGTGCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGCTCCGGCGGG 31827685 Query 16829 ACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 || ||||| |||| | ||| ||| |||||| | | | ||||| | |||| Sbjct 31827686 ACCCCCTCCTTGTCCTGCACCTTG-GCCTTCACGTTCTCGATCGTGTCCGATGACTCCAC 31827744 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || || |||||||| || || || |||||||| Sbjct 31827745 CTCCAGCGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCAT 31827792 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || ||||||||||| || ||||||||||| || Sbjct 3234592 CCACCACGCAGACGCAGCACTAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 3234651 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| || ||||| ||| | || | ||||| |||||| || Sbjct 3234652 AGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGGGGG 3234711 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 3234712 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTGTCAATGGTGTCTGACGACTCAA 3234769 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || ||||| || || || || |||||||| Sbjct 3234770 CCTCAAGGGTGATGGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCAT 3234818 >seq4 Length=48772488 Score = 102 bits (112), Expect = 7e-17 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || |||||||||||||| || |||||||||||||||| ||| | ||||| Sbjct 34033508 AGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCC 34033449 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 |||| | ||| | || |||||||| |||||| || | |||||| |||| | Sbjct 34033448 TCCAGCT------ACGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 34033395 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||| ||| || | | | | ||||| || |||| |||| ||||| || Sbjct 34033394 TGCACCTTG-GCCTTGACGTTGTCGATCGTGTCCGAGGACTCCACCTCCAGCGTGATCGT 34033336 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| || ||||| || |||||||| ||| Sbjct 34033335 CTTGCCTGTCAGGGTCTTGACGAAGATCTGCATCTTG 34033299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087861763720