Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 seq1 120 3e-22 seq2 104 2e-17 >seq3 Length=59935730 Score = 125 bits (138), Expect = 6e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || |||||||| || | || || || || | |||||||| || || | | Sbjct 53307612 AGATGCAGATCTTTGTTAAGACCCTCACTGGCAAGACTATTACTCTTGAGGTTGAGAGCT 53307553 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||||||| | ||| || | || ||||| || |||||||| || ||||| || || | Sbjct 53307552 CCGATACCATTGACAATGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCTCCAGACC 53307493 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||| | || |||||||||||||| ||| |||||||| ||| || | | ||||||| Sbjct 53307492 AGCAAAGACTCATATTTGCCGGCAAGCAGCTAGAGGATGGCCGGACATTAGCTGATTACA 53307433 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || || || || || Sbjct 53307432 ACATCCAGAAGGAGTCTAC 53307414 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || || || || |||| ||||| ||||| | | | Sbjct 53307154 ATGCAAATCTTTGTCAAGACATTGACTGGAAAGACCATCACGCTTGAGGTGGAGAGCTCT 53307095 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || ||||| ||||||||||| ||||| || ||||| Sbjct 53307094 GACACCATTGATAACGTGAAGGCCAAGATTCAGGACAAGGAGGGAATTCCTCCGGATCAG 53307035 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || |||||||| || ||| | |||||| || ||| | | ||||||||| Sbjct 53307034 CAGAGGCTCATCTTTGCCGGAAAGCAGCTGGAGGATGGGCGTACCTTAGCAGATTACAAC 53306975 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || ||||| | ||| | || |||| | || || ||| Sbjct 53306974 ATCCAAAAGGAGTCCACTCTTCATCTCGTCCTGCGCCTTCGTGGTGGT 53306927 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || ||||| || || || || |||| ||||| || || | Sbjct 2682382 AGATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCGT 2682323 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | | || || || || || |||||||| || ||||| || | Sbjct 2682322 CTGACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCACCGGACC 2682263 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || || ||||| ||| | |||||| |||||| || | || |||| Sbjct 2682262 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCTGACTACA 2682203 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||| || || |||||| | || | || |||| |||| || ||| Sbjct 2682202 ACATTCAGAAGGAGTCCACCCTTCACCTTGTGCTGCGTCTGCGTGGTGGT 2682153 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| || || || || |||| ||||| ||||| | | Sbjct 2681696 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCATCT 2681637 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 2681636 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2681577 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| ||||||| | | || |||||| Sbjct 2681576 CAGCGCCTGATCTTTGCAGGAAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAAC 2681517 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 2681516 ATCCAGAAGGAGTCCACC 2681499 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| | || || || | | || Sbjct 3234362 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGAGCTCC 3234303 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 3234302 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3234243 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | |||||| ||||||| || | || |||||| Sbjct 3234242 CAGCGTCTGATCTTTGCAGGGAAGCAGCTGGAGGATGGCCGCACCCTCGCTGACTACAAC 3234183 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 3234182 ATCCAGAAGGAGTCCACC 3234165 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| | || || || | | || Sbjct 3234590 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTTGAGAGCTCC 3234531 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 3234530 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3234471 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| ||||||| || | || |||||| Sbjct 3234470 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCTGACTACAAC 3234411 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 3234410 ATCCAGAAGGAGTCCACC 3234393 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | || || || || ||||| | || || ||| | | Sbjct 13692811 ATGCAGATTTTTGTGAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAATCTTCT 13692870 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||| ||||||||||||||||| || || || || || Sbjct 13692871 GACACGATAGATAATGTCAAGGCAAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAG 13692930 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| | |||| | | || || ||| Sbjct 13692931 CAGCGCCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGGCACACCTTAGCAGACTATAAC 13692990 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||||||||| |||||| Sbjct 13692991 ATTCAAAAAGAGTCCACC 13693008 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || || | | Sbjct 3234818 ATGCAGATCTTCGTGAAGACACTGACAGGCAAGACCATCACCCTTGAGGTTGAGTCGTCA 3234759 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || || || || || Sbjct 3234758 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 3234699 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| ||||| ||| | |||||| |||||| | | || |||||| Sbjct 3234698 CAGCGTTTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTTGCTGACTACAAC 3234639 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || |||| |||| |||| || ||| Sbjct 3234638 ATCCAGAAGGAGTCCACCCTTCACCTAGTGCTGCGTCTGCGTGGTGGT 3234591 Score = 100 bits (110), Expect = 2e-16 Identities = 143/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| |||||||| || || | | | || || || | || ||||| || || | Sbjct 13692582 AGATGCAGATTTTTGTGAAGACCTCA-CTGGCAAGACAATTACCCTTGAGGTCGAGTCAT 13692640 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | || || | || |||||||||||| |||||||| ||||| || || | Sbjct 13692641 CTGACACGATCGATAATGTGAAGGCAAAAATTCAAGATAAGGAGGGCATTCCTCCGGACC 13692700 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || |||||||| || ||||| || || | |||||| |||||| | | || |||| Sbjct 13692701 AGCAGCGTCTTATCTTCGCCGGGAAGTAGCTTGAGGATGGTCGCACCTTGGCGGACTACA 13692760 Query 22397 ACATTCAAAAAGAATCCACC 22416 | ||||| ||||| || ||| Sbjct 13692761 ATATTCAGAAAGAGTCTACC 13692780 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| | | | Sbjct 2681924 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGAGCTCT 2681865 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 2681864 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2681805 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | | || |||||| Sbjct 2681804 CAGCGTCTGATCTTCGCAGGAAAGCAGCTGGAGGATGGTCGCACCCTTGCTGACTACAAC 2681745 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | || |||| |||| || ||| Sbjct 2681744 ATCCAGAAGGAGTCCACCCTTCACCTTGTCCTGCGTCTGCGTGGTGGT 2681697 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| | || || || | | | Sbjct 3234134 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGAGCTCT 3234075 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 3234074 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3234015 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||||| || | || |||||| Sbjct 3234014 CAGCGTCTGATCTTCGCAGGGAAGCAGCTGGAGGATGGCCGCACCCTCGCTGACTACAAC 3233955 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 3233954 ATCCAGAAGGAGTCCACC 3233937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || | ||| | || || || | | Sbjct 13693039 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACCATTACTTTGGAGGTCGAGTCATCG 13693098 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| ||| |||||||||||||| || || || || || || Sbjct 13693099 GATACGATTGACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGCATCCCCCCTGACCAG 13693158 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | ||||| |||||| | | ||||||| | Sbjct 13693159 CAGCGCCTCATCTTTGCTGGGAAGCAGCTTGAGGACGGGCGCACCCTGGCGGATTACAGC 13693218 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 ||||| ||||| || ||| |||| Sbjct 13693219 ATTCAGAAAGAGTCTACCCTACA 13693241 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || ||||| || ||||| | || || || | | Sbjct 13693267 ATGCAGATCTTTGTCAAGACGCTTACTGGTAAGACCATCACTTTGGAGGTTGAGTCTTCG 13693326 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||| || || || || || Sbjct 13693327 GACACAATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCAG 13693386 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | ||||| |||||| | | ||||||||| Sbjct 13693387 CAGCGCCTGATTTTTGCTGGGAAGCAGCTTGAGGACGGGCGCACCCTGGCGGATTACAAC 13693446 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 13693447 ATCCAGAAGGAGTCCACC 13693464 >seq1 Length=75119905 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | ||||| || || |||| ||||| || || | Sbjct 27894503 AGATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTT 27894444 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | ||||| | ||| || |||| ||| || || ||||||||||| || || || || | Sbjct 27894443 CTGATACGATCGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCGGACC 27894384 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || ||||| || ||| | |||||| ||||||| | | ||||||| Sbjct 27894383 AGCAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAGGATGGCCGCACCCTGGCAGATTACA 27894324 Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422 |||| || || || |||||| | ||| Sbjct 27894323 ACATCCAGAAGGAGTCCACCCTCCAT 27894298 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || || || || | ||||| || || || | | Sbjct 27894045 ATGCAAATCTTTGTCAAGACCTTGACAGGCAAGACCATTACTCTGGAGGTCGAGTCGTCT 27893986 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||| |||||||| || || Sbjct 27893985 GACACAATCGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAG 27893926 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||||||| | |||||| ||||||| | | ||||||||| Sbjct 27893925 CAGCGCCTAATCTTTGCTGGCAAACAGCTTGAGGATGGCCGCACCCTGGCAGATTACAAC 27893866 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||||||||| Sbjct 27893865 ATCCAGAAAGAATCCAC 27893849 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || ||||| |||| ||||| || || | Sbjct 28209393 AGATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGTCGT 28209452 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | ||| | |||| ||| || || ||||||||||| ||||| || || | Sbjct 28209453 CCGACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGCATTCCTCCAGACC 28209512 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || || || ||||| || || ||| | ||||| ||||||| || |||| |||| Sbjct 28209513 AGCAGCGCCTCATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCCGACTACA 28209572 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || |||||| Sbjct 28209573 ACATCCAGAAGGAGTCCACC 28209592 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || || || || | | Sbjct 27893817 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAGACAATCACACTGGAGGTCGAGTCGTCT 27893758 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||| |||||||| || || Sbjct 27893757 GACACAATCGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCACCGGACCAG 27893698 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | |||||| ||||||| | | |||||||| Sbjct 27893697 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACAAT 27893638 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||||||| Sbjct 27893637 ATCCAGAAGGAATCCACC 27893620 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || || || || || || |||| || || || ||| | | Sbjct 28210307 ATGCAGATCTTCGTTAAGACGTTGACAGGGAAGACCATCACACTGGAGGTTGAATCTTCG 28210366 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| || || ||||||||||| || || || || || Sbjct 28210367 GACACCATTGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 28210426 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| ||||||| | | ||||||||| Sbjct 28210427 CAGCGCCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCAGATTACAAC 28210486 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 28210487 ATTCAGAAGGAGTCCACC 28210504 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || | || || || || || | || Sbjct 28210079 ATGCAGATCTTTGTAAAGACCTTGACTGGCAAGACAATTACCCTGGAGGTTGAGTCGTCC 28210138 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| || ||||| || || Sbjct 28210139 GACACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 28210198 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| |||||| | | |||||||| Sbjct 28210199 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAAT 28210258 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || |||||||| Sbjct 28210259 ATCCAGAAGGAATCCAC 28210275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || ||| | ||||| || || | || || | || || | Sbjct 27881266 AGATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATTACCCTCTAGGTCGAGTCTT 27881207 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | ||| || |||| ||| || || ||||||||||| | || || || | Sbjct 27881206 CCGACACGATCGACAATGTCAAGTCAAAGATCCAGGACAAGGAGGGCCTCCCCCCGGACC 27881147 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || || || || || ||||| ||| | |||||| ||||| || | ||||||| Sbjct 27881146 AGCAGCGCCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGGCGCACTCTCGCGGATTACA 27881087 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||| | |||||| Sbjct 27881086 ACATCCAGAAATAGTCCACC 27881067 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || || | Sbjct 28209623 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACGCTGGAGGTCGAGTCCTCT 28209682 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || || |||||||| || || || || || Sbjct 28209683 GACACGATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAG 28209742 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | ||||| ||| ||| || |||| |||||| Sbjct 28209743 CAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACCCTCGCCGACTACAAC 28209802 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || |||||||| Sbjct 28209803 ATCCAGAAGGAATCCAC 28209819 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | ||||| || || |||| || || || || || Sbjct 28415350 AGATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCT 28415409 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| | | || || || || ||||||||||| || || || || | Sbjct 28415410 CGGACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACC 28415469 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || ||||| || || ||||| ||| | |||||| ||||||| | | || |||| Sbjct 28415470 AGCAGCGCCTTATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCTGACTACA 28415529 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || || || ||||| Sbjct 28415530 ACATCCAGAAGGAGTCCAC 28415548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || || || | | Sbjct 28415808 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCT 28415867 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| || || ||||||||||| || || || || || Sbjct 28415868 GACACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 28415927 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || ||||| ||| | |||||| ||||||| | | || |||||| Sbjct 28415928 CAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAAC 28415987 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||| || |||||| Sbjct 28415988 ATCCAAAAGGAGTCCACC 28416005 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| ||||| || || | || || || || ||| | | Sbjct 27893589 ATGCAGATCTTTGTCAAGACTTTGACCGGGAAGACCATTACACTGGAGGTTGAATCTTCA 27893530 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| || || || || || Sbjct 27893529 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 27893470 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| ||||| | | ||||| ||| Sbjct 27893469 CAGCGCCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGACGCACTCTGGCGGATTATAAC 27893410 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || || || || ||| |||| Sbjct 27893409 ATCCAGAAGGAGTCTACCCTACA 27893387 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || | | Sbjct 28416036 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCG 28416095 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| || || || Sbjct 28416096 GACACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 28416155 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || ||| ||| ||| | | || |||||| Sbjct 28416156 CAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGTACCCTGGCTGACTACAAC 28416215 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 28416216 ATCCAGAAGGAGTCGACC 28416233 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || || || || | Sbjct 28415580 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCT 28415639 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || || || || Sbjct 28415640 GACACAATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 28415699 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | |||||| ||||||| | | || |||||| Sbjct 28415700 CAGCGACTCATCTTCGCGGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAAC 28415759 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 28415760 ATCCAGAAGGAGTCCAC 28415776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| ||| || ||||||||| |||| ||||| || || ||||| || || Sbjct 27861119 GACAATGTCAAGGCAAAGATCCAAGACAAGAAGGGCATTCCCCCAGACCAACAGCGCCTA 27861060 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || ||||| || || ||| | |||||| |||||| | |||||||||||||| || Sbjct 27861059 ATCTTTGCAGGTAAGCAGCTCGAGGATGGCCGCACTCATGCGGATTACAACATTCAGAAG 27861000 Query 22408 GAATCCACC 22416 || ||||| Sbjct 27860999 GAGCCCACC 27860991 >seq2 Length=59384932 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || | || || || || |||| || || ||||| || Sbjct 34838007 AAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGTCC 34837948 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| | | || || || || ||||||||||| || || || || Sbjct 34837947 TCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 34837888 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || |||||||| ||| | ||||| ||||||| || |||| ||| Sbjct 34837887 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTAC 34837828 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || |||||| | || | || | || ||||||| || Sbjct 34837827 AACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGCGCGGTGG 34837778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727856767820