Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4 500 1e-136 seq28 495 4e-135 seq5 459 3e-124 seq1 385 6e-102 seq3 228 1e-54 seq2 95.1 1e-14 >seq4 Length=48772488 Score = 500 bits (554), Expect = 1e-136 Identities = 703/987 (71%), Gaps = 0/987 (0%) Strand=Plus/Plus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 |||||| | ||| |||| ||| | || | |||| | || ||||||||||| | Sbjct 22675650 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 22675709 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | || ||||| ||||| ||| Sbjct 22675710 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCT 22675769 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | || || || | |||||||| | ||||| ||||| Sbjct 22675770 CCAGTAGATATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAAT 22675829 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || ||||||||||| || |||| | || ||||| || | ||||| ||||| || Sbjct 22675830 ATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATT 22675889 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| |||||||||||||||||| || | | | Sbjct 22675890 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 22675949 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | || ||||| | |||||||||| | | | Sbjct 22675950 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 22676009 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 || |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||| Sbjct 22676010 TTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 22676069 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || || | ||||| || ||||||||||||||||| |||| || Sbjct 22676070 GTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATA 22676129 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| |||||||| ||||| || |||||||| Sbjct 22676130 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCA 22676189 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | ||||| || || ||||| || ||||| ||| Sbjct 22676190 TTTCACATGTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGT 22676249 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || |||||| ||||| || | || Sbjct 22676250 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGT 22676309 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| || || ||||| ||||| || || || || || || || || ||||| ||||| Sbjct 22676310 TACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGC 22676369 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | ||||||||| | || Sbjct 22676370 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 22676429 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| | | ||||| || || | ||||| |||| ||||| |||||| Sbjct 22676430 GCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAAC 22676489 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || || || ||||| ||||||||||| || || ||| | | ||| || || ||| Sbjct 22676490 CTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 22676549 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| | | ||| | || || || ||||||||||| ||||| ||| | ||||| Sbjct 22676550 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 22676609 Query 172780 CACAACTTCCCATTAGACCTTGCTTCT 172806 ||||||||||| |||| || ||| || Sbjct 22676610 CACAACTTCCCTCTAGATCTAGCTGCT 22676636 >seq28 Length=135199 Score = 495 bits (548), Expect = 4e-135 Identities = 702/987 (71%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 |||||| | ||| |||| ||| | || | |||| | || ||||||||||| | Sbjct 1108 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 1049 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | || ||||| ||||| ||| Sbjct 1048 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCT 989 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | || || ||| | |||||||| | ||||| ||||| Sbjct 988 CCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 929 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || ||||||||||| || |||| | || ||||| || | ||||| ||||| || Sbjct 928 ATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATT 869 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| |||||||||||||||||| || | | | Sbjct 868 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 809 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | || ||||| | |||||||||| | | | Sbjct 808 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 749 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 || |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||| Sbjct 748 TTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 689 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || || | ||||| || ||||||||||||||||| |||| || Sbjct 688 GTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATA 629 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| || ||||| ||||| || |||||||| Sbjct 628 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCA 569 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 568 TTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 509 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || |||||| ||||| || | || Sbjct 508 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGT 449 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| || || ||||| ||||| || || || || || || || || ||||| ||||| Sbjct 448 TACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGC 389 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | ||||||||| | || Sbjct 388 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 329 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| | | ||||| || || | ||||| |||| ||||| |||||| Sbjct 328 GCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAAC 269 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || || || ||||| ||||||||||| || || ||| | | ||| || || ||| Sbjct 268 CTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 209 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| | | ||| | || || || ||||||||||| ||||| ||| | ||||| Sbjct 208 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 149 Query 172780 CACAACTTCCCATTAGACCTTGCTTCT 172806 ||||||||||| |||| || ||| || Sbjct 148 CACAACTTCCCTCTAGATCTAGCTGCT 122 Score = 336 bits (372), Expect = 3e-87 Identities = 704/1047 (67%), Gaps = 39/1047 (4%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| | | |||||||||||| || || |||||||| || | |||||||| || Sbjct 8636 TTTGATACTGTGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 8695 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 | || || | ||||||||||| | || | || || ||||| ||| || || || Sbjct 8696 TTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGAGGGTGGTTTACAGGGACAACTTTT 8755 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || || |||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 8756 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAATTTCTTA 8815 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 173185 || |||||||| || || |||| |||| | | || | |||| || | || | Sbjct 8816 ACCGCAGCAGTTTCTACCCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTAT 8870 Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245 |||| || ||||||||||| || ||||||| ||| | || || ||||||| | Sbjct 8871 GGGGCCCGGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGCCTATGGACTT 8930 Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305 ||||||| | || || | |||| ||| |||||||||||| | || || ||||| | | Sbjct 8931 TTGTAGCTCTCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTG 8990 Query 173306 CAGGACTTGTAGGCA--TCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGT 173363 | | | || || | | ||||| || ||| || ||||||||| | ||||| || Sbjct 8991 CTCG--GTCTATTCAATTGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATCGCTGT 9048 Query 173364 CTTCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423 || | | || | || || ||||| ||||| | |||||||||| || || Sbjct 9049 TTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAG 9108 Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483 || || || ||||| || ||||| | ||| | ||| | ||||| || || || || Sbjct 9109 TTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGAC 9168 Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543 ||||| || ||||| |||||||| ||||| ||| || |||| | || | ||||| || Sbjct 9169 GTTGAACCCGTTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTCCTATGCGC 9228 Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTAT--GAAGACACATCACAATATACTGAA 173601 |||||||| || || || |||| ||| | ||| |||||| ||| Sbjct 9229 TATTCATGGAGCGACCGT--AGAAAACACTCTATTCGAAGAC------------GGTGAT 9274 Query 173602 GGTAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTAT 173661 ||| | | ||||| | || ||| | || || || | |||||||||||| Sbjct 9275 GGT---------GCAAATACTTTTCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTAT 9325 Query 173662 AGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAA 173721 ||| | || || || | || ||||| || || |||||| | || ||||| |||||| Sbjct 9326 TCAATGGTCACTGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAACAAA 9385 Query 173722 AGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATA 173781 | | ||||| ||| | ||| | || || || |||| ||| | |||| | || Sbjct 9386 CGTTGGTTACATTTCTTTATGCTATTTGTCCCCGTCACCGGTTTATGGATGAGTGCTATT 9445 Query 173782 GGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGA 173841 || | || || || || || ||| | | || || |||||||| || || || || | Sbjct 9446 GGCGTAGTTGGCCTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGT 9505 Query 173842 GCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGT 173901 ||||| |||||||| || || |||||||||||||| || ||||| ||| | || || ||| Sbjct 9506 GCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGT 9565 Query 173902 ATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAA 173961 || | || |||||| || || ||||| || ||||| || | |||| || || || Sbjct 9566 ATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAG 9625 Query 173962 GTGTTACCAAGAGGTAACGCACTTTAA 173988 || ||||| | || ||||| |||||| Sbjct 9626 GTTCTACCACGTGGAAACGCTCTTTAA 9652 >seq5 Length=28563423 Score = 459 bits (508), Expect = 3e-124 Identities = 670/943 (71%), Gaps = 3/943 (0%) Strand=Plus/Minus Query 171865 TGGTTCGGTGTACTCATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCA 171924 ||||||||||| | |||||||| || | || ||| | | || || | || Sbjct 14559503 TGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCC 14559444 Query 171925 TTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTC 171984 ||||| ||||| ||||| || ||||| || || || | || || ||| | |||||||| Sbjct 14559443 TTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTA 14559384 Query 171985 TTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTC 172044 | ||||| ||||| || ||||||||||| || |||| | || ||||| || | Sbjct 14559383 CTTTATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTG 14559324 Query 172045 CACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCT 172104 ||||| ||||| || || ||||| ||| |||| |||||||| || ||||||||||||||| Sbjct 14559323 CACTTTTACCCAATTTGAGAAGCTGCATCCGTTGATGAATGATTATACAATGGTGGTCCT 14559264 Query 172105 TATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGG 172164 ||| || | | | | |||||| | | ||| | | || ||||| | ||||| Sbjct 14559263 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGG 14559204 Query 172165 GAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTA 172224 ||||| | | | || |||||| || ||||| ||| ||||||||||| ||||| Sbjct 14559203 GAACTTAGTTTCCG-TTTGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTT 14559145 Query 172225 TCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGT 172284 |||| || |||||| ||| | | || || | ||||| || |||||||||||| Sbjct 14559144 GCAGCTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGT 14559085 Query 172285 ATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAAC 172344 ||||| |||| || || ||||| || ||||||||| | || ||||| |||||||| ||| Sbjct 14559084 ATGCCTTTAGGAATATCTGGTACTTTAAACTTTATGATTGTATTCCAGGCAGAGCACAAC 14559025 Query 172345 ATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTC 172404 || || ||||||| ||| |||||| ||| ||||| || | || || || || ||||| Sbjct 14559024 ATCCTTATGCATCATTT-CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTC 14558966 Query 172405 TCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAA 172464 || ||||| ||||| || || || ||| | | ||||| || || |||||| ||| Sbjct 14558965 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAA 14558906 Query 172465 TCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCA 172524 || || | || ||||| || || ||||| ||||| || || || || || || || Sbjct 14558905 TCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCT 14558846 Query 172525 CACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTC-AAGAAGTCT 172583 || ||||| ||||| || | |||||||| |||||| |||||||||||| | | | Sbjct 14558845 CATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCTGTTCTTT 14558786 Query 172584 TCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTG 172643 ||||||||| | || | || ||||| ||| | | ||||| || || | ||||| | Sbjct 14558785 ACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAG 14558726 Query 172644 TACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGG 172703 ||| |||| |||||||| || || ||||| ||||||||||| || || ||| | | || Sbjct 14558725 TACTATGGGGTTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGG 14558666 Query 172704 TAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTAT 172763 | || || ||| |||| ||| | | ||| | || || || ||||||||||| || Sbjct 14558665 TCGTGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAAT 14558606 Query 172764 GCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCT 172806 ||| ||| | ||||| ||||||||||| |||| || ||| || Sbjct 14558605 GCACGAACGTAATGCTCACAACTTCCCTCTAGATCTAGCTGCT 14558563 >seq1 Length=75119905 Score = 385 bits (426), Expect = 6e-102 Identities = 555/783 (71%), Gaps = 0/783 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 |||||| | ||| |||| ||| | || | |||| | || ||||||||||| | Sbjct 3929698 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3929639 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | || || | || ||||| ||||| ||| Sbjct 3929638 ATGATCCCTACCTTATTGACCGCAACTTTTGTATTTATTATCGCCTTCATCGCAGCCCCT 3929579 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | || || ||| | |||||||| | ||||| ||||| Sbjct 3929578 CCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 3929519 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || ||||||||||| || |||| | || ||||| || | ||||| ||||| || Sbjct 3929518 ATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATT 3929459 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| |||||||||||||||||| || | | | Sbjct 3929458 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 3929399 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | || ||||| | |||||||||| | | | Sbjct 3929398 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 3929339 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 || |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||| Sbjct 3929338 TTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 3929279 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || || | ||||| || ||||||||||||||||| |||| || Sbjct 3929278 GTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATA 3929219 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| |||||||| ||||| || |||||||| Sbjct 3929218 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCA 3929159 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 3929158 TTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 3929099 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || |||||| ||||| || | || Sbjct 3929098 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGT 3929039 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| || || ||||| ||||| || || || || || || || || ||||| ||||| Sbjct 3929038 TACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGC 3928979 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | ||||||||| | || Sbjct 3928978 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 3928919 Query 172600 GTT 172602 ||| Sbjct 3928918 GTT 3928916 Score = 336 bits (372), Expect = 3e-87 Identities = 704/1047 (67%), Gaps = 39/1047 (4%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| | | |||||||||||| || || |||||||| || | |||||||| || Sbjct 54999470 TTTGATACTGTGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 54999411 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 | || || | ||||||||||| | || | || || ||||| ||| || || || Sbjct 54999410 TTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGAGGGTGGTTTACAGGGACAACTTTT 54999351 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || || |||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 54999350 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAATTTCTTA 54999291 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 173185 || |||||||| || || |||| |||| | | || | |||| || | || | Sbjct 54999290 ACCGCAGCAGTTTCTACCCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTAT 54999236 Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245 |||| || ||||||||||| || ||||||| ||| | || || ||||||| | Sbjct 54999235 GGGGCCCGGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGCCTATGGACTT 54999176 Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305 ||||||| | || || | |||| ||| |||||||||||| | || || ||||| | | Sbjct 54999175 TTGTAGCTCTCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTG 54999116 Query 173306 CAGGACTTGTAGGCA--TCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGT 173363 | | | || || | | ||||| || ||| || ||||||||| | ||||| || Sbjct 54999115 CTCG--GTCTATTCAATTGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATCGCTGT 54999058 Query 173364 CTTCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423 || | | || | || || ||||| ||||| | |||||||||| || || Sbjct 54999057 TTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAG 54998998 Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483 || || || ||||| || ||||| | ||| | ||| | ||||| || || || || Sbjct 54998997 TTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGAC 54998938 Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543 ||||| || ||||| |||||||| ||||| ||| || |||| | || | ||||| || Sbjct 54998937 GTTGAACCCGTTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTCCTATGCGC 54998878 Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTAT--GAAGACACATCACAATATACTGAA 173601 |||||||| || || || |||| ||| | ||| |||||| ||| Sbjct 54998877 TATTCATGGAGCGACCGT--AGAAAACACTCTATTCGAAGAC------------GGTGAT 54998832 Query 173602 GGTAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTAT 173661 ||| | | ||||| | || ||| | || || || | |||||||||||| Sbjct 54998831 GGT---------GCAAATACTTTTCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTAT 54998781 Query 173662 AGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAA 173721 ||| | || || || | || ||||| || || |||||| | || ||||| |||||| Sbjct 54998780 TCAATGGTCACTGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAACAAA 54998721 Query 173722 AGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATA 173781 | | ||||| ||| | ||| | || || || |||| ||| | |||| | || Sbjct 54998720 CGTTGGTTACATTTCTTTATGCTATTTGTCCCCGTCACCGGTTTATGGATGAGTGCTATT 54998661 Query 173782 GGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGA 173841 || | || || || || || ||| | | || || |||||||| || || || || | Sbjct 54998660 GGCGTAGTTGGCCTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGT 54998601 Query 173842 GCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGT 173901 ||||| |||||||| || || |||||||||||||| || ||||| ||| | || || ||| Sbjct 54998600 GCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGT 54998541 Query 173902 ATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAA 173961 || | || |||||| || || ||||| || ||||| || | |||| || || || Sbjct 54998540 ATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAG 54998481 Query 173962 GTGTTACCAAGAGGTAACGCACTTTAA 173988 || ||||| | || ||||| |||||| Sbjct 54998480 GTTCTACCACGTGGAAACGCTCTTTAA 54998454 Score = 336 bits (372), Expect = 3e-87 Identities = 704/1047 (67%), Gaps = 39/1047 (4%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| | | |||||||||||| || || |||||||| || | |||||||| || Sbjct 74443231 TTTGATACTGTGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 74443290 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 | || || | ||||||||||| | || | || || ||||| ||| || || || Sbjct 74443291 TTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGAGGGTGGTTTACAGGGACAACTTTT 74443350 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || || |||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 74443351 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAATTTCTTA 74443410 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 173185 || |||||||| || || |||| |||| | | || | |||| || | || | Sbjct 74443411 ACCGCAGCAGTTTCTACCCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTAT 74443465 Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245 |||| || ||||||||||| || ||||||| ||| | || || ||||||| | Sbjct 74443466 GGGGCCCGGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGCCTATGGACTT 74443525 Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305 ||||||| | || || | |||| ||| |||||||||||| | || || ||||| | | Sbjct 74443526 TTGTAGCTCTCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTG 74443585 Query 173306 CAGGACTTGTAGGCA--TCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGT 173363 | | | || || | | ||||| || ||| || ||||||||| | ||||| || Sbjct 74443586 CTCG--GTCTATTCAATTGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATCGCTGT 74443643 Query 173364 CTTCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423 || | | || | || || ||||| ||||| | |||||||||| || || Sbjct 74443644 TTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAG 74443703 Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483 || || || ||||| || ||||| | ||| | ||| | ||||| || || || || Sbjct 74443704 TTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGAC 74443763 Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543 ||||| || ||||| |||||||| ||||| ||| || |||| | || | ||||| || Sbjct 74443764 GTTGAACCCGTTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTCCTATGCGC 74443823 Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTAT--GAAGACACATCACAATATACTGAA 173601 |||||||| || || || |||| ||| | ||| |||||| ||| Sbjct 74443824 TATTCATGGAGCGACCGT--AGAAAACACTCTATTCGAAGAC------------GGTGAT 74443869 Query 173602 GGTAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTAT 173661 ||| | | ||||| | || ||| | || || || | |||||||||||| Sbjct 74443870 GGT---------GCAAATACTTTTCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTAT 74443920 Query 173662 AGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAA 173721 ||| | || || || | || ||||| || || |||||| | || ||||| |||||| Sbjct 74443921 TCAATGGTCACTGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAACAAA 74443980 Query 173722 AGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATA 173781 | | ||||| ||| | ||| | || || || |||| ||| | |||| | || Sbjct 74443981 CGTTGGTTACATTTCTTTATGCTATTTGTCCCCGTCACCGGTTTATGGATGAGTGCTATT 74444040 Query 173782 GGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGA 173841 || | || || || || || ||| | | || || |||||||| || || || || | Sbjct 74444041 GGCGTAGTTGGCCTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGT 74444100 Query 173842 GCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGT 173901 ||||| |||||||| || || |||||||||||||| || ||||| ||| | || || ||| Sbjct 74444101 GCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGT 74444160 Query 173902 ATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAA 173961 || | || |||||| || || ||||| || ||||| || | |||| || || || Sbjct 74444161 ATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAG 74444220 Query 173962 GTGTTACCAAGAGGTAACGCACTTTAA 173988 || ||||| | || ||||| |||||| Sbjct 74444221 GTTCTACCACGTGGAAACGCTCTTTAA 74444247 >seq3 Length=59935730 Score = 228 bits (252), Expect = 1e-54 Identities = 317/444 (71%), Gaps = 0/444 (0%) Strand=Plus/Plus Query 172363 CACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCT 172422 |||||| ||| ||||| || | || || || || ||||| || ||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 172423 TTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATAC 172482 || || || ||| | | ||||| || || |||||| ||||| || | || ||| Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 172483 AAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGT 172542 || || || ||||| ||||| || || || || || || || || ||||| ||||| || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 172543 CTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTT 172602 | |||||||| |||||| |||||||||||| | | | ||||||||| | || | | Sbjct 16821877 TTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCT 16821936 Query 172603 TTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTT 172662 | ||||| ||| | | ||||| || || | ||||| |||| ||||| |||||||| Sbjct 16821937 TGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTA 16821996 Query 172663 AACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGG 172722 || || ||||| ||||||||||| || || ||| | | ||| || || ||| ||| Sbjct 16821997 AATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 16822056 Query 172723 GGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACAC 172782 | ||| | | ||| | || || || ||||||||||| ||||| ||| | ||||| ||| Sbjct 16822057 GCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCAC 16822116 Query 172783 AACTTCCCATTAGACCTTGCTTCT 172806 |||||||| |||| || ||| || Sbjct 16822117 AACTTCCCTCTAGATCTAGCTGCT 16822140 >seq2 Length=59384932 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| |||||||| || ||| ||||| | || |||||||| |||||||| ||||| || || Sbjct 48395155 TGGAGCAGATGTTTGCCATTTAAACCTTCACAAGACATTTTGTATTCCTCATGGTGGAGG 48395214 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||||| | |||||||||||||| Sbjct 48395215 TGGTCCTGGCATGGGTCCTATTGGTGT 48395241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050994182080