Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq28 554 7e-153 seq4 545 3e-150 seq5 504 1e-137 seq1 437 1e-117 seq3 266 5e-66 >seq28 Length=135199 Score = 554 bits (614), Expect = 7e-153 Identities = 706/972 (73%), Gaps = 0/972 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| |||||| | ||| | || ||||| ||||| | ||||| ||| | | | | Sbjct 1087 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 1028 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 1027 GCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATT 968 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| ||||||||||| | ||||| ||||| || |||||||||||| || | Sbjct 967 CGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATT 908 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| ||||||||||| ||||| ||||| || |||||||| ||| | ||||| Sbjct 907 CCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGAT 848 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||||||||| |||| | || || | | |||||| | ||||| | Sbjct 847 GAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTA 788 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || || || | ||||||||||| || | | || |||||| | |||||||| Sbjct 787 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATT 728 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| ||| || ||| | | || || | Sbjct 727 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTATT 668 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || |||||||||| |||||| | ||||| ||||| || ||||||| ||| Sbjct 667 GGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATG 608 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| |||||||| ||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct 607 ATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCT 548 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| | | Sbjct 547 GGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 488 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || ||||| | |||||| || | |||||||| || || |||||||| Sbjct 487 ATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAA 428 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 || || || || || || ||||| || ||||| ||||| || | ||||||||||| || Sbjct 427 GAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCT 368 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 |||||||||||| | | | ||||||||| | || || | ||||| | | ||| Sbjct 367 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATC 308 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| ||||| | ||| | ||||||||||||||||| || || ||||| |||||| Sbjct 307 TGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTCAATTTCAAC 248 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || ||||| || || ||| |||||| ||||||||| || | | ||| | Sbjct 247 CAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGT 188 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || ||||||||||||||||||||||| ||||| |||||||||||||| |||| | Sbjct 187 GCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCTA 128 Query 216275 GCTGCTGCTGAA 216286 |||||| |||| Sbjct 127 GCTGCTCTTGAA 116 >seq4 Length=48772488 Score = 545 bits (604), Expect = 3e-150 Identities = 704/972 (72%), Gaps = 0/972 (0%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| |||||| | ||| | || ||||| ||||| | ||||| ||| | | | | Sbjct 22675671 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 22675730 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 22675731 GCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATT 22675790 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| || ||||||||||| | ||||| ||||| || |||||||||||| || | Sbjct 22675791 CGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATT 22675850 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| ||||||||||| ||||| ||||| || |||||||| ||| | ||||| Sbjct 22675851 CCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTTGGGAAGCTGCATCCGTTGAT 22675910 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||||||||| |||| | || || | | |||||| | ||||| | Sbjct 22675911 GAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTA 22675970 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || || || | ||||||||||| || | | || |||||| | |||||||| Sbjct 22675971 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATT 22676030 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| ||| || ||| | | || || | Sbjct 22676031 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTATT 22676090 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || |||||||||| |||||| | ||||| ||||| || ||||||| ||| Sbjct 22676091 GGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATG 22676150 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| |||||||| ||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct 22676151 ATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCT 22676210 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| || || ||||| | ||| ||| ||||| ||||| | || || ||| | | Sbjct 22676211 GGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 22676270 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || ||||| | |||||| || | |||||||| || || |||||||| Sbjct 22676271 ATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAA 22676330 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 || || || || || || ||||| || ||||| ||||| || | ||||||||||| || Sbjct 22676331 GAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCT 22676390 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 |||||||||||| | | | ||||||||| | || || | ||||| | | ||| Sbjct 22676391 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATC 22676450 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| ||||| | ||| | ||||||||||||||||| || || ||||| |||||| Sbjct 22676451 TGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTCAATTTCAAC 22676510 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || ||||| || || ||| |||||| ||||||||| || | | ||| | Sbjct 22676511 CAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGT 22676570 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || ||||||||||||||||||||||| ||||| |||||||||||||| |||| | Sbjct 22676571 GCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCTA 22676630 Query 216275 GCTGCTGCTGAA 216286 |||||| |||| Sbjct 22676631 GCTGCTCTTGAA 22676642 >seq5 Length=28563423 Score = 504 bits (558), Expect = 1e-137 Identities = 698/973 (72%), Gaps = 3/973 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| |||||| | ||| | | ||||| ||||| | ||||| ||| | | | | Sbjct 14559527 ACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 14559468 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 14559467 GCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATT 14559408 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| ||||||||||| | ||||| ||||| || |||||||||||| || | Sbjct 14559407 CGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATT 14559348 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| ||||||||||| ||||| ||||| || || ||||| ||| | ||||| Sbjct 14559347 CCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGAGAAGCTGCATCCGTTGAT 14559288 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 ||||| | ||||||||||| |||| | || || | | |||||| | ||||| | Sbjct 14559287 GAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTA 14559228 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || || || | ||||||||||| || | | || |||||| |||||||| Sbjct 14559227 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG-TTTGGTATGCACCCTTGGATT 14559169 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| ||| || ||| | | || || | Sbjct 14559168 GTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTATT 14559109 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || |||||||||| |||||| | ||||| ||||| || || |||| ||| Sbjct 14559108 GGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTAAACTTTATG 14559049 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| |||||||| ||||||||||| || ||||| |||| |||||||||||||| ||| Sbjct 14559048 ATTGTATTCCAGGCAGAGCACAACATCCTTATGCA-TCATTTCACATGTTAGGTGTAGCT 14558990 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| | | Sbjct 14558989 GGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 14558930 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || ||||| | |||||| || | |||||||| || || |||||||| Sbjct 14558929 ATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAA 14558870 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 || || || || || || || || || ||||| ||||| || | ||||||||||| || Sbjct 14558869 GAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCT 14558810 Query 216035 TCTTTCAACAACTC-AAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTAT 216093 |||||||||||| | | | ||||||||| | || || | ||||| | | || Sbjct 14558809 AGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAAT 14558750 Query 216094 CTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAA 216153 |||| ||||| | ||| | ||||||| ||||||||| || || ||||| ||||| Sbjct 14558749 CTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATGGATTCAATTTCAA 14558690 Query 216154 CCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAG 216213 ||| ||||| || || ||| |||||| ||||||||| || | | ||| | Sbjct 14558689 CCAATCTGTAGTTGATAGTCAAGGTCGTGTTATTAATACTTGGGCTGATATCATCAACCG 14558630 Query 216214 AGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTT 216273 || ||||||||||||||||||||||| ||||| |||||||||||||| |||| | Sbjct 14558629 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 14558570 Query 216274 GGCTGCTGCTGAA 216286 |||||| |||| Sbjct 14558569 AGCTGCTCTTGAA 14558557 >seq1 Length=75119905 Score = 437 bits (484), Expect = 1e-117 Identities = 551/754 (73%), Gaps = 2/754 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| |||||| | ||| | || ||||| ||||| | ||||| ||| | | | | Sbjct 3929677 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 3929618 Query 215375 GCTACCACTTGT-TTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAAT 215433 || || |||| || || | || |||||||| || ||||| || ||||| || || || Sbjct 3929617 GCAACTT-TTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTAT 3929559 Query 215434 CAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 215493 | ||||| ||| ||||||||||| | ||||| ||||| || |||||||||||| || | Sbjct 3929558 TCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTAT 3929499 Query 215494 ACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGA 215553 |||| ||| ||||||||||| ||||| ||||| || |||||||| ||| | ||||| Sbjct 3929498 TCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGA 3929439 Query 215554 CGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTAT 215613 |||||| | ||||||||||| |||| | || || | | |||||| | ||||| | Sbjct 3929438 TGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 3929379 Query 215614 TTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGAT 215673 || || || | ||||||||||| || | | || |||||| | |||||||| Sbjct 3929378 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 3929319 Query 215674 CTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATT 215733 |||||| || || || ||||| | ||||| ||| || ||| | | || || | Sbjct 3929318 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 3929259 Query 215734 CGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACAT 215793 ||||| || |||||||||| |||||| | ||||| ||||| || ||||||| || Sbjct 3929258 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 3929199 Query 215794 GTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGC 215853 | |||| |||||||| ||||||||||| || ||||| ||||| |||||||||||||| || Sbjct 3929198 GATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 3929139 Query 215854 TGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCT 215913 |||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| | | Sbjct 3929138 TGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 3929079 Query 215914 AATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGA 215973 ||||| || || ||||| | |||||| || | |||||||| || || |||||||| Sbjct 3929078 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 3929019 Query 215974 GGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGC 216033 || || || || || || ||||| || ||||| ||||| || | ||||||||||| || Sbjct 3929018 AGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 3928959 Query 216034 ATCTTTCAACAACTCAAGAAGTCTTCACTTCTTC 216067 |||||||||||| | | | ||||||||| Sbjct 3928958 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTC 3928925 >seq3 Length=59935730 Score = 266 bits (294), Expect = 5e-66 Identities = 329/450 (73%), Gaps = 0/450 (0%) Strand=Plus/Plus Query 215837 CACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCA 215896 |||||||||||||| |||||||| ||||| ||||| | ||| ||| ||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 215897 CTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTAC 215956 | || || ||| | | ||||| || || ||||| | |||||| || | |||||| Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 215957 AAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGC 216016 || || || |||||||| || || || || || || ||||| || ||||| ||||| || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 216017 CTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCA 216076 | ||||||||||| || |||||||||||| | | | ||||||||| | || || Sbjct 16821877 TTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCT 16821936 Query 216077 TTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTT 216136 | ||||| | | |||||| ||||| | ||| | ||||||||||||||||| Sbjct 16821937 TGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTA 16821996 Query 216137 AACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGG 216196 || || ||||| |||||||| ||||| || || ||| |||||| ||||||| Sbjct 16821997 AATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 16822056 Query 216197 GCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCAC 216256 || || | | ||| | || ||||||||||||||||||||||| ||||| |||||| Sbjct 16822057 GCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCAC 16822116 Query 216257 AACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 |||||||| |||| | |||||| |||| Sbjct 16822117 AACTTCCCTCTAGATCTAGCTGCTCTTGAA 16822146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745081339221440