Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq28 533 2e-146 seq4 529 2e-145 seq5 497 1e-135 seq1 417 9e-112 seq3 242 4e-59 >seq28 Length=135199 Score = 533 bits (590), Expect = 2e-146 Identities = 699/968 (72%), Gaps = 0/968 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | || || | || | || ||||||||||| ||||||||||| Sbjct 1099 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 1040 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | || ||||||||||| || || || || Sbjct 1039 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 980 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | ||||| || | ||||| ||||| || |||||| Sbjct 979 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 920 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| |||||||| | ||||| || || ||||||||||| Sbjct 919 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCT 860 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || |||||||||||| | || || | | |||||| Sbjct 859 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 800 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || || |||||| | |||||||||| | |||||| |||||| Sbjct 799 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATG 740 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 739 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTG 680 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| ||||| || || |||||| |||| || || ||||| Sbjct 679 ATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 620 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | |||||||| || ||||||||||| |||||||| ||||| || ||| Sbjct 619 TTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTTCACATG 560 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 559 TTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 500 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || || || || || || || | || |||||||| Sbjct 499 ACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTT 440 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| ||||| || || || ||||| || || ||||| || ||||| || | ||| Sbjct 439 GGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATC 380 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || ||||| |||| | | ||||||||| | ||| | | ||| Sbjct 379 TTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCT 320 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| ||| | | |||||| | || ||||| || ||||| |||||| Sbjct 319 GTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGA 260 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || ||| | ||| || || ||| ||||| || Sbjct 259 TTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGAT 200 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 | | ||| | || || || ||||||||||||||||| || |||||||| ||||||||| Sbjct 199 ATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTC 140 Query 170659 CCACTTGA 170666 || || || Sbjct 139 CCTCTAGA 132 >seq4 Length=48772488 Score = 529 bits (586), Expect = 2e-145 Identities = 698/968 (72%), Gaps = 0/968 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | || || | || | || ||||||||||| ||||||||||| Sbjct 22675659 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 22675718 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | || ||||||||||| || || || || Sbjct 22675719 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 22675778 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||| | | ||||| || | ||||| ||||| || |||||| Sbjct 22675779 ATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 22675838 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| |||||||| | ||||| || || ||||||||||| Sbjct 22675839 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTTGGGAAGCT 22675898 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || |||||||||||| | || || | | |||||| Sbjct 22675899 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 22675958 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || || |||||| | |||||||||| | |||||| |||||| Sbjct 22675959 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATG 22676018 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 22676019 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTG 22676078 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| ||||| || || |||||| |||| || || ||||| Sbjct 22676079 ATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 22676138 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | |||||||| |||||||||||||| |||||||| ||||| || ||| Sbjct 22676139 TTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATG 22676198 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | || || || | || ||| || ||||| ||||| | ||| Sbjct 22676199 TTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 22676258 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || || || || || || || | || |||||||| Sbjct 22676259 ACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTT 22676318 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| ||||| || || || ||||| || || ||||| || ||||| || | ||| Sbjct 22676319 GGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATC 22676378 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || ||||| |||| | | ||||||||| | ||| | | ||| Sbjct 22676379 TTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCT 22676438 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| ||| | | |||||| | || ||||| || ||||| |||||| Sbjct 22676439 GTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGA 22676498 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || ||| | ||| || || ||| ||||| || Sbjct 22676499 TTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGAT 22676558 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 | | ||| | || || || ||||||||||||||||| || |||||||| ||||||||| Sbjct 22676559 ATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTC 22676618 Query 170659 CCACTTGA 170666 || || || Sbjct 22676619 CCTCTAGA 22676626 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 170341 AACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGA 170400 ||| | || |||||||| || ||||| ||||| || || || ||||| || || ||| Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 170401 TACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTC 170460 || ||||| || | ||||||||||||||||| || ||| | || | | | ||||| Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTTT 45407059 Query 170461 TTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATG 170520 ||| | ||| | | |||| |||| | |||||||| ||| | |||||| | || ||| Sbjct 45407058 TTCTTGGCTGCTTGGCCTGCAGTAGGAATCTGGTTCACTGATTTAGGTATTAGTACTATG 45406999 Query 170521 G 170521 | Sbjct 45406998 G 45406998 >seq5 Length=28563423 Score = 497 bits (550), Expect = 1e-135 Identities = 694/969 (72%), Gaps = 3/969 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | || || | || | | ||||||||||| ||||||||||| Sbjct 14559539 TGGATAACTAGCACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCCCT 14559480 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | || ||||||||||| || || || || Sbjct 14559479 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 14559420 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | ||||| || | ||||| ||||| || |||||| Sbjct 14559419 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 14559360 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| |||||||| | ||||| || || ||||| ||||| Sbjct 14559359 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGAGAAGCT 14559300 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| || || || || |||||||||||| | || || | | |||||| Sbjct 14559299 GCATCCGTTGATGAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 14559240 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || || |||||| | |||||||||| | |||||| |||||| Sbjct 14559239 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTT-GGTATG 14559181 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 | |||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 14559180 CACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTG 14559121 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| ||||| || || |||||| |||| || || ||||| Sbjct 14559120 ATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 14559061 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | |||||||| |||||||||||||| |||||||| |||| || ||| Sbjct 14559060 TTAAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCA-TCATTTCACATG 14559002 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 14559001 TTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 14558942 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || || || || || || || | || |||||||| Sbjct 14558941 ACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTT 14558882 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| ||||| || || || ||||| || || ||||| || ||||| || | ||| Sbjct 14558881 GGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAATC 14558822 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTC-GTAGTCTTCACTTCTTCCTTGCTACATTCCC 170477 |||||||||||||| || ||||| || || | | ||||||||| | ||| | | || Sbjct 14558821 TTCCAATATGCTAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 14558762 Query 170478 TGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGG 170537 ||||||| | |||||||| ||| | | |||||| | || |||| || ||||| ||||| Sbjct 14558761 TGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATGG 14558702 Query 170538 ATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGA 170597 ||| || |||||||| || | || ||| | ||| || || ||| ||||| || Sbjct 14558701 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTTATTAATACTTGGGCTGA 14558642 Query 170598 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTT 170657 | | ||| | || || || ||||||||||||||||| || |||||||| |||||||| Sbjct 14558641 TATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTT 14558582 Query 170658 CCCACTTGA 170666 ||| || || Sbjct 14558581 CCCTCTAGA 14558573 >seq1 Length=75119905 Score = 417 bits (462), Expect = 9e-112 Identities = 555/771 (72%), Gaps = 0/771 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | || || | || | || ||||||||||| ||||||||||| Sbjct 3929689 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 3929630 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | ||||| | || ||||||||||| || || || || Sbjct 3929629 ACCTTATTGACCGCAACTTTTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGAT 3929570 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | ||||| || | ||||| ||||| || |||||| Sbjct 3929569 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 3929510 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| |||||||| | ||||| || || ||||||||||| Sbjct 3929509 GGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCT 3929450 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || |||||||||||| | || || | | |||||| Sbjct 3929449 GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 3929390 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || || |||||| | |||||||||| | |||||| |||||| Sbjct 3929389 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATG 3929330 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 3929329 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTG 3929270 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| ||||| || || |||||| |||| || || ||||| Sbjct 3929269 ATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACT 3929210 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | |||||||| |||||||||||||| |||||||| ||||| || ||| Sbjct 3929209 TTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATG 3929150 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 3929149 TTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 3929090 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || || || || || || || | || |||||||| Sbjct 3929089 ACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTT 3929030 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| ||||| || || || ||||| || || ||||| || ||||| || | ||| Sbjct 3929029 GGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATC 3928970 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCT 170469 |||||||||||||| || ||||| |||| | | ||||||||| | ||| Sbjct 3928969 TTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 3928919 >seq3 Length=59935730 Score = 242 bits (268), Expect = 4e-59 Identities = 314/434 (72%), Gaps = 0/434 (0%) Strand=Plus/Plus Query 170233 CATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCA 170292 || ||| ||| || |||||| | ||||| || | || ||| || ||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 170293 CTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATAC 170352 | ||||| ||| | | ||||| || || || || || || || || | || ||| Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 170353 AAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGA 170412 ||||| || ||||| ||||| || || || ||||| || || ||||| || ||||| || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 170413 CTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACA 170472 | ||||||||||||||||| || ||||| |||| | | ||||||||| | ||| | Sbjct 16821877 TTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCT 16821936 Query 170473 TTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTT 170532 | ||||||||| | |||||||| ||| | | |||||| | || ||||| || ||||| Sbjct 16821937 TGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTA 16821996 Query 170533 AATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGG 170592 |||||||| || |||||||| || | || ||| | ||| || || ||| ||| Sbjct 16821997 AATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 16822056 Query 170593 GCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACAC 170652 || || | | ||| | || || || ||||||||||||||||| || |||||||| ||| Sbjct 16822057 GCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCAC 16822116 Query 170653 AACTTCCCACTTGA 170666 |||||||| || || Sbjct 16822117 AACTTCCCTCTAGA 16822130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847796003200