Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 116 2e-21 seq3 109 4e-19 seq2 95.1 8e-15 >seq1 Length=75119905 Score = 116 bits (128), Expect = 2e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||||| |||| ||| | ||| || ||||| ||||| ||||| | ||| | || | Sbjct 28209610 CCTCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 28209551 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 || || ||||| ||||| ||||| || || || ||||||||| | || | |||||||| Sbjct 28209550 GTCCTCAAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTT 28209491 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||||| |||||| | |||| || | ||| || || | ||| || Sbjct 28209490 GTCCTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCAAGGGTGAT 28209431 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAG 34989 |||||| || ||||| |||||||||||||||||||| | | ||| Sbjct 28209430 GGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGCATAG 28209387 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | || ||| | |||||||| | |||| || ||||| ||||| ||||| | Sbjct 28415806 CCACCACGCAGCCTGAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCC 28415747 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || ||||| || || || || || ||||| |||||||| | || Sbjct 28415746 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 28415687 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| || ||| | || | ||| || ||| || Sbjct 28415686 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATTGTGTCAGAGGACTCGACC 28415627 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || ||||| || || ||||| ||||| |||||||||||||| Sbjct 28415626 TCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 28415580 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | ||| | |||| || | ||| || ||||| ||||| || || | Sbjct 27894275 CCACCCCTGAGCCTGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCC 27894334 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||||||| || ||||| || || || || |||||||| | || Sbjct 27894335 AGGGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 27894394 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| ||||| | |||| ||| | ||| || Sbjct 27894395 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCGATCGTATCAGAAGACTCGACC 27894454 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAG 34989 || | ||| ||||| || || ||||| |||||||||||||||||||| | | ||| Sbjct 27894455 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCATAG 27894509 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | || ||| | |||| ||| | |||| || ||||| ||||| ||||| | Sbjct 28415578 CCACCACGCAGCCTGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCC 28415519 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || ||||| || || || || || || || |||||||| | || Sbjct 28415518 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 28415459 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| || ||| | |||| || || ||| || Sbjct 28415458 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACC 28415399 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 28415398 TCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 28415352 Score = 102 bits (112), Expect = 5e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| || ||||| || || ||||| Sbjct 28416226 TCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATCTTCGAGCTGCTTGCCAGCAAAG 28416167 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| ||||| || Sbjct 28416166 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC--AT 28416109 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || || | ||| | |||||| |||| ||| ||||| || || ||||| ||||| Sbjct 28416108 --TGTCAATTGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTT 28416051 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 28416050 GACAAAGATCTGCAT 28416036 Score = 98.7 bits (108), Expect = 6e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 34793 TTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATAT 34852 |||||| ||||| || |||| || | || |||| |||||||| || || || || || Sbjct 27881076 TTTCTGGATGTTGTAATCCGCGAGAGTGCGCCCATCCTCCAGCTGCTTGCCAGCGAAGAT 27881135 Query 34853 TAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGC 34912 || || |||||||| | || | ||||||||||| ||||| ||||| | Sbjct 27881136 GAGGCGCTGCTGGTCCGGGGGGAGGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTC 27881195 Query 34913 TATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 |||| || | ||| || | || ||| ||||| || || ||||||||||||||||| Sbjct 27881196 GATCGTGTCGGAAGACTCGACCTAGAGGGTAATGGTCTTGCCGGTGAGAGTCTTCACAAA 27881255 Query 34973 GATCTGCAT 34981 ||||||||| Sbjct 27881256 GATCTGCAT 27881264 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| || ||||| ||||| ||||||| ||| | || |||| || Sbjct 28416472 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCA 28416413 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || ||||| || || ||||||||| | || | || |||||||| Sbjct 28416412 AGCTGCTTACCAGCGAATATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGG 28416353 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | || | ||| | |||||| || | || ||||| || Sbjct 28416352 ATCTTGGCCTTCACATTGTCAATAGTGTCAGATGACTCAACTTCAAGCGTGATGGTCTTG 28416293 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| |||||||| ||||||||||| Sbjct 28416292 CCTGTGAGGGTCTTCACGAAGATCTGCAT 28416264 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||||||| ||||| || || | ||| | || |||| || Sbjct 27893837 ACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCA 27893896 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| ||||| || |||||||| | || | ||||||||||| Sbjct 27893897 AGCTGTTTGCCAGCAAAGATTAGGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGG 27893956 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || || ||||||| ||| | ||| || || | || ||||| Sbjct 27893957 ATCTTCGCCTTCAC--AT--TATCGATTGTGTCAGACGACTCGACCTCCAGAGTAATGGT 27894012 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | ||||| |||||||| ||||| Sbjct 27894013 CTTGCCTGTCAAGGTCTTGACAAAGATTTGCAT 27894045 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| |||||||| |||| || | ||| |||| || ||||| || || ||||| Sbjct 27893399 TCCTTCTGGATGTTATAATCCGCCAGAGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAG 27893458 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| |||||| || ||| Sbjct 27893459 ATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 27893518 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||||| || | || ||||| || || || | |||||| ||| Sbjct 27893519 TCGATGGTGTCTGAAGATTCAACCTCCAGTGTAATGGTCTTCCCGGTCAAAGTCTTGACA 27893578 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 27893579 AAGATCTGCAT 27893589 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||||||||| | | | | || |||| | ||||| || ||||| || Sbjct 55138367 TCTTTCTGAATGTTATAGTCTGCCAAGGTGCGCCCATCGGCGAGCTGCTTCCCGGCGAAG 55138426 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | |||||||| || || ||| || || Sbjct 55138427 ATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTATCTTGGATTTTCGCCTTCAC---- 55138482 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| ||| | |||||| || | || || || || || ||||| ||||| Sbjct 55138483 GTTATCGATAGTGTCAGATGACTCAACCTCAAGAGTAATTGTCTTGCCTGTGAGGGTCTT 55138542 Query 34967 CACAAAGATCTGCAT 34981 |||||| |||||||| Sbjct 55138543 CACAAATATCTGCAT 55138557 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | || ||| | |||| || | |||| ||| ||||| ||||| ||||| | Sbjct 28209849 CCACCACGCAGCCTGAGCACCAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCG 28209790 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || |||||||| || || || |||||||| | || Sbjct 28209789 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 28209730 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||||| || |||||| || || | |||| ||| || ||| || Sbjct 28209729 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCAGAGGACTCGACC 28209670 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| || || || || ||||| || ||||||||||| Sbjct 28209669 TCCAGCGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 28209623 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||||| |||| ||| | ||| || || || ||||| ||||| | ||| | || | Sbjct 28416023 CCTCAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCC 28415964 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || ||||| || || || || || || | |||||||| | || | |||||||| Sbjct 28415963 ATCCTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTT 28415904 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||||| || ||| | || | ||| | ||| || |||| || || Sbjct 28415903 GTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGCGTGAT 28415844 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || ||||| ||||| |||||||||||||| Sbjct 28415843 GGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 28415808 >seq3 Length=59935730 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| | |||| | || |||| ||| Sbjct 2681488 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 2681547 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || || |||||||| | || | ||||||||||| Sbjct 2681548 AGCTGCTTTCCTGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 2681607 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| | ||| || || | ||| ||||| || Sbjct 2681608 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTG 2681667 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||||||||||||||||||| Sbjct 2681668 CCAGTCAAAGTCTTCACAAAGATCTGCATA 2681697 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| |||||||||||||| | | | | | |||| || ||||| || || ||||| Sbjct 13693001 TCTTTTTGAATGTTATAGTCTGCTAAGGTGTGCCCATCCTCAAGCTGCTTCCCAGCAAAG 13692942 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| |||||| ||||| Sbjct 13692941 ATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATTA 13692882 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||||| ||| | ||||| || | || ||||| || || || || ||||||||| Sbjct 13692881 TCTATCGTGTCAGAAGATTCAACCTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTCACA 13692822 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 13692821 AAAATCTGCAT 13692811 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| | |||| | || |||| |||||||| Sbjct 2681721 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCCTCCAGCTG 2681780 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||| || || || || || |||||||| | || | ||||||||||| ||||| Sbjct 2681781 CTTTCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 2681840 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 || ||| | || | ||| | ||| || || | ||| ||||| || || || Sbjct 2681841 GGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGT 2681900 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 ||| ||||| || |||||||||||| Sbjct 2681901 GAGGGTCTTGACGAAGATCTGCATA 2681925 Score = 98.7 bits (108), Expect = 6e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| ||||| | ||| | || |||| |||||||| Sbjct 2682177 GTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTG 2682236 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || || |||||||| | || | |||||||| || ||||| Sbjct 2682237 CTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTT 2682296 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 || ||| | || | ||| | |||||| || | ||| ||||| || || || Sbjct 2682297 GGCCTTAACGTTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 2682356 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 | ||||||||||||||||||||| Sbjct 2682357 CAAAGTCTTCACAAAGATCTGCAT 2682380 Score = 95.1 bits (104), Expect = 8e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| | ||| | || |||| |||||||| Sbjct 2681949 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCTTCCAGCTG 2682008 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || || || |||||||| | || | |||||||| || ||||| Sbjct 2682009 CTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTT 2682068 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 || ||| | || | ||| | ||| || || | ||| ||||| || || || Sbjct 2682069 GGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 2682128 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 | |||||||||||||||||||||| Sbjct 2682129 CAAAGTCTTCACAAAGATCTGCATA 2682153 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| |||||||| || || || || Sbjct 3234400 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 3234459 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 3234460 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 3234519 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | ||| ||||| || || ||||| ||||| ||| Sbjct 3234520 TCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 3234579 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 3234580 AAGATCTGCATA 3234591 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| | ||| | || |||| ||| Sbjct 3233926 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCC 3233985 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 3233986 AGCTGCTTCCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 3234045 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| | ||| || || | ||| ||||| || Sbjct 3234046 ATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAAGGTGATGGTCTTG 3234105 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| |||||||||||||| Sbjct 3234106 CCGGTGAGGGTCTTGACAAAGATCTGCAT 3234134 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| |||||||| || || ||||| Sbjct 3234172 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTGCTTCCCTGCAAAG 3234231 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 3234232 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 3234291 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | ||| ||||| || || ||||| ||||| ||| Sbjct 3234292 TCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 3234351 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 3234352 AAGATCTGCAT 3234362 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| | |||| | || |||| |||||||| Sbjct 3234615 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCCTCCAGCTG 3234674 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || | || |||||||| | || | ||||||||||| ||||| Sbjct 3234675 CTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 3234734 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||||| | || | || | |||||| || | ||| ||||| || || || Sbjct 3234735 GGCCTTGACATTGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATGGTCTTGCCTGT 3234794 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||| ||||||||||| Sbjct 3234795 CAGTGTCTTCACGAAGATCTGCAT 3234818 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || |||| ||| | || | || || ||||| || || ||||| Sbjct 13693457 TCCTTCTGGATGTTGTAATCCGCCAGGGTGCGCCCGTCCTCAAGCTGCTTCCCAGCAAAA 13693398 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||||| ||||| Sbjct 13693397 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTTCGCCTTGAC---- 13693342 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | |||||| || | || ||||| || || || || ||||| Sbjct 13693341 GTTGTCGATTGTGTCCGAAGACTCAACCTCCAAAGTGATGGTCTTACCAGTAAGCGTCTT 13693282 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 13693281 GACAAAGATCTGCAT 13693267 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||| | || |||| ||| | || | || || ||||| || || ||||| Sbjct 13693229 TCTTTCTGAATGCTGTAATCCGCCAGGGTGCGCCCGTCCTCAAGCTGCTTCCCAGCAAAG 13693170 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| |||||| ||||| Sbjct 13693169 ATGAGGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTGACATTG 13693110 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | || ||||| || || ||||| ||||| || Sbjct 13693109 TCAATCGTATCCGATGACTCGACCTCCAAAGTAATGGTCTTGCCGGTGAGTGTCTTGACG 13693050 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 13693049 AAGATCTGCAT 13693039 >seq2 Length=59384932 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | | |||| ||| | ||| || ||||| ||||| ||||| | Sbjct 10639229 CCTCCCCTCAGTCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10639288 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || |||||||| || ||||| || || || || |||||||| | || Sbjct 10639289 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 10639348 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||||| || ||||| || ||| | || | || || ||| || Sbjct 10639349 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 10639408 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | || ||||| || |||||||| |||||||| ||||||||||| || Sbjct 10639409 TCCAGCGTGATGGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATCTT 10639458 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| | ||| | || | || || Sbjct 34837796 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 34837855 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| |||| | ||||||||||| Sbjct 34837856 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 34837915 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | || || ||| || || | || ||||| || Sbjct 34837916 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTG 34837975 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| || |||||||| ||||||||||| || Sbjct 34837976 CCCGTCAGGGTCTTCACGAAGATCTGCATCTT 34838007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633489218784